Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002757A_C01 KMC002757A_c01
(580 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G96602 probable receptor protein kinase F14G9.24 [imported]... 63 1e-12
gb|AAF02840.1|AC009894_11 Similar to serine/threonine kinases [A... 63 1e-12
ref|NP_564709.1| similar to receptor-like protein kinase, putati... 63 1e-12
ref|NP_176009.1| receptor-like protein kinase, putative; protein... 62 3e-11
pir||F96602 hypothetical protein T6H22.8.2 [imported] - Arabidop... 62 3e-11
>pir||G96602 probable receptor protein kinase F14G9.24 [imported] - Arabidopsis
thaliana gi|12321749|gb|AAG50909.1|AC069159_10 receptor
protein kinase, putative [Arabidopsis thaliana]
Length = 2062
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -3
Query: 572 LSEFDKEEARRVLGIALSCTQTSPTLRPSISRVVACSSGDSEVSAVTSR 426
L+EF+ EE +R++GIAL CTQTS LRP +SRVVA SGD EVS VTS+
Sbjct: 1954 LTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSK 2002
Score = 58.9 bits (141), Expect = 4e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 578 PGLSEFDKEEARRVLGIALSCTQTSPTLRPSISRVVACSSGDSEVSAVTSR 426
P L+EFDKEE +RV+G+A CTQT +RP++SRVV +GD E++ ++
Sbjct: 891 PDLTEFDKEEVKRVIGVAFLCTQTDHAIRPTMSRVVGMLTGDVEITEANAK 941
Score = 30.8 bits (68), Expect(2) = 1e-12
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 424 PGYLTDWKFDDVSS 383
PGYLTDW+FDD ++
Sbjct: 2003 PGYLTDWRFDDTTA 2016
>gb|AAF02840.1|AC009894_11 Similar to serine/threonine kinases [Arabidopsis thaliana]
Length = 1086
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -3
Query: 572 LSEFDKEEARRVLGIALSCTQTSPTLRPSISRVVACSSGDSEVSAVTSR 426
L+EF+ EE +R++GIAL CTQTS LRP +SRVVA SGD EVS VTS+
Sbjct: 978 LTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSK 1026
Score = 30.8 bits (68), Expect(2) = 1e-12
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 424 PGYLTDWKFDDVSS 383
PGYLTDW+FDD ++
Sbjct: 1027 PGYLTDWRFDDTTA 1040
>ref|NP_564709.1| similar to receptor-like protein kinase, putative; protein id:
At1g56140.1 [Arabidopsis thaliana]
Length = 1032
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -3
Query: 572 LSEFDKEEARRVLGIALSCTQTSPTLRPSISRVVACSSGDSEVSAVTSR 426
L+EF+ EE +R++GIAL CTQTS LRP +SRVVA SGD EVS VTS+
Sbjct: 924 LTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSK 972
Score = 30.8 bits (68), Expect(2) = 1e-12
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 424 PGYLTDWKFDDVSS 383
PGYLTDW+FDD ++
Sbjct: 973 PGYLTDWRFDDTTA 986
>ref|NP_176009.1| receptor-like protein kinase, putative; protein id: At1g56130.1
[Arabidopsis thaliana]
Length = 1032
Score = 61.6 bits (148), Expect(2) = 3e-11
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3
Query: 572 LSEFDKEEARRVLGIALSCTQTSPTLRPSISRVVACSSGDSEVSAVTSR 426
L++F+ EEA+R++GIAL CTQTS LRP +SRVVA SGD E+ VTS+
Sbjct: 926 LTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSK 974
Score = 27.7 bits (60), Expect(2) = 3e-11
Identities = 8/13 (61%), Positives = 12/13 (91%)
Frame = -1
Query: 424 PGYLTDWKFDDVS 386
PGY++DW+FDD +
Sbjct: 975 PGYVSDWRFDDTT 987
>pir||F96602 hypothetical protein T6H22.8.2 [imported] - Arabidopsis thaliana
gi|6056374|gb|AAF02838.1|AC009894_9 Similar to
serine/threonine kinases [Arabidopsis thaliana]
Length = 1029
Score = 61.6 bits (148), Expect(2) = 3e-11
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3
Query: 572 LSEFDKEEARRVLGIALSCTQTSPTLRPSISRVVACSSGDSEVSAVTSR 426
L++F+ EEA+R++GIAL CTQTS LRP +SRVVA SGD E+ VTS+
Sbjct: 923 LTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSK 971
Score = 27.7 bits (60), Expect(2) = 3e-11
Identities = 8/13 (61%), Positives = 12/13 (91%)
Frame = -1
Query: 424 PGYLTDWKFDDVS 386
PGY++DW+FDD +
Sbjct: 972 PGYVSDWRFDDTT 984
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 530,328,344
Number of Sequences: 1393205
Number of extensions: 11788955
Number of successful extensions: 33372
Number of sequences better than 10.0: 180
Number of HSP's better than 10.0 without gapping: 32133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33347
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
