Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002725A_C01 KMC002725A_c01
(492 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568490.1| Lon protease homolog 2 precursor; protein id: A... 139 2e-32
gb|AAL09722.1| AT5g26860/F2P16_120 [Arabidopsis thaliana] 139 2e-32
dbj|BAC21361.1| putative ATP-dependent proteinase LON2 [Oryza sa... 138 3e-32
gb|AAB48000.1| LON protease homolog [Arabidopsis thaliana] 138 4e-32
ref|NP_566259.1| Lon protease, putative; protein id: At3g05790.1... 135 2e-31
>ref|NP_568490.1| Lon protease homolog 2 precursor; protein id: At5g26860.1, supported
by cDNA: gi_15982762, supported by cDNA: gi_20259499
[Arabidopsis thaliana] gi|27735209|sp|P93655|LON2_ARATH
Lon protease homolog 2, mitochondrial precursor
gi|20259500|gb|AAM13870.1| putative Lon protease homolog
2 precursor [Arabidopsis thaliana]
gi|21436459|gb|AAM51430.1| putative Lon protease homolog
2 precursor [Arabidopsis thaliana]
Length = 940
Score = 139 bits (350), Expect = 2e-32
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = -3
Query: 490 KKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSGVKTIVFPSANRRDYDELAPNVKE 311
KKPV+KDLAMTGEVTLTG+ILPIGGVKEKTIAARRS +KTI+FP ANRRD+DELA NVKE
Sbjct: 856 KKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFPEANRRDFDELAENVKE 915
Query: 310 GLDVHFVDDFKQIFDLAFGDD 248
GL+VHFVDD+ +IF+LAFG D
Sbjct: 916 GLNVHFVDDYGKIFELAFGYD 936
>gb|AAL09722.1| AT5g26860/F2P16_120 [Arabidopsis thaliana]
Length = 431
Score = 139 bits (350), Expect = 2e-32
Identities = 67/81 (82%), Positives = 76/81 (93%)
Frame = -3
Query: 490 KKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSGVKTIVFPSANRRDYDELAPNVKE 311
KKPV+KDLAMTGEVTLTG+ILPIGGVKEKTIAARRS +KTI+FP ANRRD+DELA NVKE
Sbjct: 347 KKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFPEANRRDFDELAENVKE 406
Query: 310 GLDVHFVDDFKQIFDLAFGDD 248
GL+VHFVDD+ +IF+LAFG D
Sbjct: 407 GLNVHFVDDYGKIFELAFGYD 427
>dbj|BAC21361.1| putative ATP-dependent proteinase LON2 [Oryza sativa (japonica
cultivar-group)]
Length = 976
Score = 138 bits (348), Expect = 3e-32
Identities = 66/77 (85%), Positives = 74/77 (95%)
Frame = -3
Query: 487 KPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSGVKTIVFPSANRRDYDELAPNVKEG 308
KPVKKDLAMTGEVTLTG+ILPIGGVKEKTIAARRS VKTIVFP+AN+RD+DELAPNVKEG
Sbjct: 891 KPVKKDLAMTGEVTLTGRILPIGGVKEKTIAARRSAVKTIVFPAANKRDFDELAPNVKEG 950
Query: 307 LDVHFVDDFKQIFDLAF 257
L+VHFVD + +IFD+AF
Sbjct: 951 LEVHFVDTYNEIFDIAF 967
>gb|AAB48000.1| LON protease homolog [Arabidopsis thaliana]
Length = 941
Score = 138 bits (347), Expect = 4e-32
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = -3
Query: 490 KKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSGVKTIVFPSANRRDYDELAPNVKE 311
KKPV+KDLAMTGEVTLTG+ILPIGGVKEKTIAARRS +KTI+FP ANRRD+DELA NVKE
Sbjct: 857 KKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAARRSQIKTIIFPEANRRDFDELAENVKE 916
Query: 310 GLDVHFVDDFKQIFDLAFG 254
GL+VHFVDD+ +IF+LAFG
Sbjct: 917 GLNVHFVDDYGKIFELAFG 935
>ref|NP_566259.1| Lon protease, putative; protein id: At3g05790.1 [Arabidopsis
thaliana] gi|6714392|gb|AAF26081.1|AC012393_7 putative
mitochondrial LON ATP-dependent protease [Arabidopsis
thaliana]
Length = 942
Score = 135 bits (341), Expect = 2e-31
Identities = 66/81 (81%), Positives = 75/81 (92%)
Frame = -3
Query: 490 KKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSGVKTIVFPSANRRDYDELAPNVKE 311
KKPV+KDLAMTGEVTLTG+IL IGGVKEKTIAARRS VK I+FP ANRRD+DELA NVKE
Sbjct: 861 KKPVRKDLAMTGEVTLTGRILAIGGVKEKTIAARRSQVKVIIFPEANRRDFDELARNVKE 920
Query: 310 GLDVHFVDDFKQIFDLAFGDD 248
GL+VHFVD+++QIF+LAFG D
Sbjct: 921 GLEVHFVDEYEQIFELAFGYD 941
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 387,359,889
Number of Sequences: 1393205
Number of extensions: 7624001
Number of successful extensions: 34868
Number of sequences better than 10.0: 313
Number of HSP's better than 10.0 without gapping: 34436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34857
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
