Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002716A_C01 KMC002716A_c01
(453 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_508843.1| EB module containing serine protease inhibitor ... 30 8.6
ref|XP_157382.1| hypothetical protein XP_157382 [Mus musculus] 30 8.6
>ref|NP_508843.1| EB module containing serine protease inhibitor precursor family
member (45.6 kD) [Caenorhabditis elegans]
gi|15011775|gb|AAB04576.2| Hypothetical protein M03F4.6
[Caenorhabditis elegans]
Length = 413
Score = 30.4 bits (67), Expect = 8.6
Identities = 15/41 (36%), Positives = 21/41 (50%)
Frame = +2
Query: 326 PCKSA*VRKSRQCTSPYNPCISNTPCSKSPLTNKVSENDLC 448
PC+ K QC P+N CI+ T C +P T + +E C
Sbjct: 133 PCE-----KDSQCVDPFNACIAGT-CLCAPGTTRDTERGFC 167
>ref|XP_157382.1| hypothetical protein XP_157382 [Mus musculus]
Length = 492
Score = 30.4 bits (67), Expect = 8.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 326 PCKSA*VRKSRQCTSPYNPCISNTP 400
PC S+ R R C+ + PC+S+TP
Sbjct: 401 PCVSSTPRALRSCSGDWEPCVSSTP 425
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 389,318,168
Number of Sequences: 1393205
Number of extensions: 8284588
Number of successful extensions: 18021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17996
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11120710906
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
