Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002714A_C01 KMC002714A_c01
(667 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF31705.1|AF221856_1 heat-shock protein 80 [Euphorbia esula] 248 4e-65
gb|AAN77149.1| fiber protein Fb9 [Gossypium barbadense] 238 4e-62
sp|P36181|HS80_LYCES HEAT SHOCK COGNATE PROTEIN 80 gi|7441893|pi... 235 4e-61
gb|AAN31859.1| putative heat shock protein 81-2 (HSP81-2) [Arabi... 230 1e-59
ref|NP_200414.1| HEAT SHOCK PROTEIN 81-2 (HSP81-2) (sp|P55737); ... 228 4e-59
>gb|AAF31705.1|AF221856_1 heat-shock protein 80 [Euphorbia esula]
Length = 320
Score = 248 bits (634), Expect = 4e-65
Identities = 125/130 (96%), Positives = 126/130 (96%)
Frame = -3
Query: 665 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKS 486
LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIM+ELRKRADAD NDKS
Sbjct: 191 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMDELRKRADADKNDKS 250
Query: 485 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEADADMPPLEEADVD 306
VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGE DADMP LEEAD D
Sbjct: 251 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEGDADMPALEEADAD 310
Query: 305 AEGSKMEEVD 276
AEGSKMEEVD
Sbjct: 311 AEGSKMEEVD 320
>gb|AAN77149.1| fiber protein Fb9 [Gossypium barbadense]
Length = 176
Score = 238 bits (608), Expect = 4e-62
Identities = 124/132 (93%), Positives = 126/132 (94%), Gaps = 2/132 (1%)
Frame = -3
Query: 665 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKS 486
LVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINP+NPIMEELRKRADAD NDKS
Sbjct: 47 LVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPDNPIMEELRKRADADKNDKS 106
Query: 485 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAG--EADADMPPLEEAD 312
VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAG EADADMPPLE D
Sbjct: 107 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEAEADADMPPLE--D 164
Query: 311 VDAEGSKMEEVD 276
DAEGSKMEEVD
Sbjct: 165 ADAEGSKMEEVD 176
>sp|P36181|HS80_LYCES HEAT SHOCK COGNATE PROTEIN 80 gi|7441893|pir||T07037 heat shock
protein 80 - tomato gi|170456|gb|AAB01376.1| heat shock
cognate protein 80 gi|445601|prf||1909348A heat shock
protein hsp80
Length = 699
Score = 235 bits (600), Expect = 4e-61
Identities = 117/130 (90%), Positives = 125/130 (96%)
Frame = -3
Query: 665 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKS 486
LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPEN IM+ELRKRADAD NDKS
Sbjct: 570 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKS 629
Query: 485 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEADADMPPLEEADVD 306
VKDLVLLLFETALLTSGFSL++PNTFGNRIHRMLKLGLSIDE++G+ADADMP LE+ + D
Sbjct: 630 VKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEAD 689
Query: 305 AEGSKMEEVD 276
AEGSKMEEVD
Sbjct: 690 AEGSKMEEVD 699
>gb|AAN31859.1| putative heat shock protein 81-2 (HSP81-2) [Arabidopsis thaliana]
Length = 699
Score = 230 bits (587), Expect = 1e-59
Identities = 120/131 (91%), Positives = 125/131 (94%), Gaps = 1/131 (0%)
Frame = -3
Query: 665 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKS 486
LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPEN IM+ELRKRADAD NDKS
Sbjct: 570 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKS 629
Query: 485 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSI-DEDAGEADADMPPLEEADV 309
VKDLVLLLFETALLTSGFSLD+PNTFGNRIHRMLKLGLSI D+DA EADA+MPPLE+ D
Sbjct: 630 VKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSIDDDDAVEADAEMPPLED-DA 688
Query: 308 DAEGSKMEEVD 276
DAEGSKMEEVD
Sbjct: 689 DAEGSKMEEVD 699
>ref|NP_200414.1| HEAT SHOCK PROTEIN 81-2 (HSP81-2) (sp|P55737); protein id:
At5g56030.1, supported by cDNA: gi_17065347 [Arabidopsis
thaliana] gi|2495365|sp|P55737|HS82_ARATH Heat shock
protein 81-2 (HSP81-2) gi|9758623|dbj|BAB09285.1| HEAT
SHOCK PROTEIN 81-2 (HSP81-2) [Arabidopsis thaliana]
gi|17065348|gb|AAL32828.1| HEAT SHOCK PROTEIN 81-2
(HSP81-2) [Arabidopsis thaliana]
gi|22136254|gb|AAM91205.1| heat shock protein 81-2
[Arabidopsis thaliana] gi|25054933|gb|AAN71943.1|
putative heat-shock protein HSP81-2 [Arabidopsis
thaliana] gi|27311859|gb|AAO00895.1| Unknown protein
[Arabidopsis thaliana] gi|445127|prf||1908431B heat
shock protein HSP81-2
Length = 699
Score = 228 bits (582), Expect = 4e-59
Identities = 119/131 (90%), Positives = 125/131 (94%), Gaps = 1/131 (0%)
Frame = -3
Query: 665 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKS 486
LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPEN IM+ELRKRADAD NDKS
Sbjct: 570 LVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKS 629
Query: 485 VKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSI-DEDAGEADADMPPLEEADV 309
VKDLVLLLFETALLTSGFSLD+PNTFG+RIHRMLKLGLSI D+DA EADA+MPPLE+ D
Sbjct: 630 VKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDAVEADAEMPPLED-DA 688
Query: 308 DAEGSKMEEVD 276
DAEGSKMEEVD
Sbjct: 689 DAEGSKMEEVD 699
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 548,504,984
Number of Sequences: 1393205
Number of extensions: 11613650
Number of successful extensions: 61059
Number of sequences better than 10.0: 440
Number of HSP's better than 10.0 without gapping: 43744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52589
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
