Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002700A_C01 KMC002700A_c01
(482 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181541.1| putative protein kinase; protein id: At2g40120.... 93 1e-18
ref|NP_680568.1| similar to putative protein kinase; protein id:... 93 2e-18
dbj|BAB02869.1| Ser-Thr protein kinase-like protein [Arabidopsis... 78 6e-14
ref|NP_188402.1| protein kinase, putative; protein id: At3g17750... 78 6e-14
gb|AAL87322.1| unknown protein [Arabidopsis thaliana] 77 1e-13
>ref|NP_181541.1| putative protein kinase; protein id: At2g40120.1, supported by
cDNA: gi_14334459, supported by cDNA: gi_17979100
[Arabidopsis thaliana] gi|25408667|pir||E84825 probable
protein kinase [imported] - Arabidopsis thaliana
gi|4587987|gb|AAD25928.1|AF085279_1 hypothetical Ser-Thr
protein kinase [Arabidopsis thaliana]
gi|14334460|gb|AAK59428.1| putative protein kinase
[Arabidopsis thaliana] gi|17979101|gb|AAL47494.1|
putative protein kinase [Arabidopsis thaliana]
Length = 570
Score = 93.2 bits (230), Expect = 1e-18
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = -2
Query: 481 EYDVYYANEETDQLEYIIPEESSLEQHLQVTDAMFIDFVKYLLNINPKRRPTTKQALKHP 302
EYD+Y+ NEE++++EYII EESSLE+ LQV+D +F+DFV+ LL+INP RRPT +AL HP
Sbjct: 502 EYDLYHLNEESNEIEYIITEESSLEEQLQVSDELFLDFVRTLLDINPLRRPTALEALNHP 561
Query: 301 WLS 293
WLS
Sbjct: 562 WLS 564
>ref|NP_680568.1| similar to putative protein kinase; protein id: At4g03175.1
[Arabidopsis thaliana]
Length = 139
Score = 92.8 bits (229), Expect = 2e-18
Identities = 41/63 (65%), Positives = 53/63 (84%)
Frame = -2
Query: 481 EYDVYYANEETDQLEYIIPEESSLEQHLQVTDAMFIDFVKYLLNINPKRRPTTKQALKHP 302
EYD+Y+ NEE++++EYII EESSLE+ LQV+D +F+DFV+ LL INP RRPT +AL HP
Sbjct: 72 EYDLYHLNEESNEIEYIITEESSLEEQLQVSDELFLDFVRTLLEINPLRRPTALEALNHP 131
Query: 301 WLS 293
WLS
Sbjct: 132 WLS 134
>dbj|BAB02869.1| Ser-Thr protein kinase-like protein [Arabidopsis thaliana]
Length = 1266
Score = 77.8 bits (190), Expect = 6e-14
Identities = 33/64 (51%), Positives = 50/64 (77%)
Frame = -2
Query: 472 VYYANEETDQLEYIIPEESSLEQHLQVTDAMFIDFVKYLLNINPKRRPTTKQALKHPWLS 293
+Y N+E++ LEY+IP++SSL + L + D FIDFV YLL ++PK+RP+ +ALKHPWL+
Sbjct: 1199 LYERNQESNNLEYLIPKKSSLRRRLPMGDQGFIDFVAYLLQVDPKKRPSAFEALKHPWLT 1258
Query: 292 HVYK 281
+ Y+
Sbjct: 1259 YPYE 1262
>ref|NP_188402.1| protein kinase, putative; protein id: At3g17750.1, supported by cDNA:
gi_19699070 [Arabidopsis thaliana]
gi|19699071|gb|AAL90903.1| AT3g17750/MIG5_4 [Arabidopsis
thaliana] gi|27764950|gb|AAO23596.1| At3g17750/MIG5_4
[Arabidopsis thaliana]
Length = 1138
Score = 77.8 bits (190), Expect = 6e-14
Identities = 33/64 (51%), Positives = 50/64 (77%)
Frame = -2
Query: 472 VYYANEETDQLEYIIPEESSLEQHLQVTDAMFIDFVKYLLNINPKRRPTTKQALKHPWLS 293
+Y N+E++ LEY+IP++SSL + L + D FIDFV YLL ++PK+RP+ +ALKHPWL+
Sbjct: 1071 LYERNQESNNLEYLIPKKSSLRRRLPMGDQGFIDFVAYLLQVDPKKRPSAFEALKHPWLT 1130
Query: 292 HVYK 281
+ Y+
Sbjct: 1131 YPYE 1134
>gb|AAL87322.1| unknown protein [Arabidopsis thaliana]
Length = 276
Score = 76.6 bits (187), Expect = 1e-13
Identities = 33/64 (51%), Positives = 48/64 (74%)
Frame = -2
Query: 472 VYYANEETDQLEYIIPEESSLEQHLQVTDAMFIDFVKYLLNINPKRRPTTKQALKHPWLS 293
+Y N+E+++LEY+IP+ +SL L + D F DFV +LL INPK+RP+ +ALKHPWLS
Sbjct: 209 LYERNQESNRLEYLIPKRTSLRHRLPMGDQGFTDFVAHLLEINPKKRPSAAEALKHPWLS 268
Query: 292 HVYK 281
+ Y+
Sbjct: 269 YPYE 272
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,367,886
Number of Sequences: 1393205
Number of extensions: 8820858
Number of successful extensions: 28185
Number of sequences better than 10.0: 874
Number of HSP's better than 10.0 without gapping: 27280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28159
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
