Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002681A_C01 KMC002681A_c01
(681 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567059.1| putative protein; protein id: At3g57890.1, supp... 100 1e-20
pir||T46011 hypothetical protein T10K17.100 - Arabidopsis thalia... 100 1e-20
ref|NP_181752.1| hypothetical protein; protein id: At2g42230.1 [... 70 2e-11
ref|NP_703385.1| P-type ATPase, putative [Plasmodium falciparum ... 34 2.1
gb|ZP_00069539.1| hypothetical protein [Oenococcus oeni MCW] 33 4.7
>ref|NP_567059.1| putative protein; protein id: At3g57890.1, supported by cDNA:
gi_15450720, supported by cDNA: gi_17380619 [Arabidopsis
thaliana] gi|15450721|gb|AAK96632.1|
AT3g57890/T10K17_100 [Arabidopsis thaliana]
gi|17380620|gb|AAL36073.1| AT3g57890/T10K17_100
[Arabidopsis thaliana]
Length = 573
Score = 100 bits (250), Expect = 1e-20
Identities = 47/63 (74%), Positives = 53/63 (83%)
Frame = -1
Query: 678 LPDAYRASQHKNQNNLREIRQLLREASLEESRKRELSSALHVYFKEWLYASGNIRQLYCL 499
LPDAY A+Q +N N E R+ L+EA LEE+RKRELSSALHVYFK+WLYASGNIRQLYCL
Sbjct: 511 LPDAYMAAQQRNLKNFEETRRSLKEAPLEENRKRELSSALHVYFKDWLYASGNIRQLYCL 570
Query: 498 HGD 490
GD
Sbjct: 571 QGD 573
>pir||T46011 hypothetical protein T10K17.100 - Arabidopsis thaliana
gi|6729532|emb|CAB67617.1| putative protein [Arabidopsis
thaliana]
Length = 570
Score = 100 bits (250), Expect = 1e-20
Identities = 47/63 (74%), Positives = 53/63 (83%)
Frame = -1
Query: 678 LPDAYRASQHKNQNNLREIRQLLREASLEESRKRELSSALHVYFKEWLYASGNIRQLYCL 499
LPDAY A+Q +N N E R+ L+EA LEE+RKRELSSALHVYFK+WLYASGNIRQLYCL
Sbjct: 508 LPDAYMAAQQRNLKNFEETRRSLKEAPLEENRKRELSSALHVYFKDWLYASGNIRQLYCL 567
Query: 498 HGD 490
GD
Sbjct: 568 QGD 570
>ref|NP_181752.1| hypothetical protein; protein id: At2g42230.1 [Arabidopsis
thaliana] gi|7452467|pir||T00932 hypothetical protein
At2g42230 [imported] - Arabidopsis thaliana
gi|2673914|gb|AAB88648.1| hypothetical protein
[Arabidopsis thaliana]
Length = 551
Score = 70.5 bits (171), Expect = 2e-11
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = -1
Query: 678 LPDAYRASQHKNQNNLREIRQLLREASLEESRKRELSSALHVYFKEWLY 532
LPDAY+A Q N NL E RQ LRE LEE+RKREL++A H+YFK+WLY
Sbjct: 454 LPDAYKAVQQTNLKNLEETRQSLRETPLEENRKRELTTAFHMYFKDWLY 502
>ref|NP_703385.1| P-type ATPase, putative [Plasmodium falciparum 3D7]
gi|23504525|emb|CAD51405.1| P-type ATPase, putative
[Plasmodium falciparum 3D7]
Length = 2393
Score = 33.9 bits (76), Expect = 2.1
Identities = 17/72 (23%), Positives = 34/72 (46%)
Frame = +2
Query: 83 QNTSKSAMTMLQSESQQKFPEILK*MHKTPSWKTCSTLDLGRGNFSQSH*FRLTKYYSNY 262
Q +KS + ++ ++K + +K + + N+ S+ ++ YY+N
Sbjct: 222 QMNAKSFFFFISTDKKKKKNDYIKNSYHDDDLDDDDIQNKDNNNYYYSNIYKKNSYYNNS 281
Query: 263 FHKQKITNQIGN 298
FHK+ I+NQ N
Sbjct: 282 FHKKSISNQYSN 293
>gb|ZP_00069539.1| hypothetical protein [Oenococcus oeni MCW]
Length = 600
Score = 32.7 bits (73), Expect = 4.7
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 4 ERQNYIYWHKPKLSRFCVLKLSPTILAKY 90
+RQ Y +W P L F +L+LSP+ L KY
Sbjct: 302 QRQLYQFWGLPNLPSFSLLQLSPSALKKY 330
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 568,617,759
Number of Sequences: 1393205
Number of extensions: 11928493
Number of successful extensions: 33026
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33016
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30270070164
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
