Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002678A_C01 KMC002678A_c01
(518 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180081.1| putative protein kinase; protein id: At2g25090.... 46 3e-04
dbj|BAB93194.1| putative serine/threonine protein kinase [Oryza ... 39 0.036
ref|NP_196324.1| serine threonine protein kinase-like protein; p... 39 0.047
gb|AAF86506.1|AF286050_1 CBL-interacting protein kinase 2 [Arabi... 39 0.047
ref|NP_199394.1| serine threonine protein kinase; protein id: At... 39 0.047
>ref|NP_180081.1| putative protein kinase; protein id: At2g25090.1, supported by
cDNA: gi_14009297 [Arabidopsis thaliana]
gi|25387041|pir||B84644 probable protein kinase
[imported] - Arabidopsis thaliana
gi|14009298|gb|AAK50348.1| CBL-interacting protein
kinase 16 [Arabidopsis thaliana]
Length = 469
Score = 45.8 bits (107), Expect = 3e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -1
Query: 518 FCEEDVRPALKDIVWTWQGE 459
FCE+DVRPALKDIVW+WQG+
Sbjct: 427 FCEDDVRPALKDIVWSWQGD 446
>dbj|BAB93194.1| putative serine/threonine protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 502
Score = 38.9 bits (89), Expect = 0.036
Identities = 14/18 (77%), Positives = 17/18 (93%)
Frame = -1
Query: 512 EEDVRPALKDIVWTWQGE 459
+ED+RPALKDIVW WQG+
Sbjct: 421 KEDIRPALKDIVWVWQGD 438
>ref|NP_196324.1| serine threonine protein kinase-like protein; protein id:
At5g07070.1, supported by cDNA: gi_9280635 [Arabidopsis
thaliana] gi|11346419|pir||T48478 serine/threonine
protein kinase-like protein - Arabidopsis thaliana
gi|7546685|emb|CAB87263.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
gi|9759563|dbj|BAB11165.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
Length = 456
Score = 38.5 bits (88), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1
Query: 512 EEDVRPALKDIVWTWQGE 459
EED+RPAL DIVW WQGE
Sbjct: 421 EEDLRPALADIVWVWQGE 438
>gb|AAF86506.1|AF286050_1 CBL-interacting protein kinase 2 [Arabidopsis thaliana]
Length = 456
Score = 38.5 bits (88), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1
Query: 512 EEDVRPALKDIVWTWQGE 459
EED+RPAL DIVW WQGE
Sbjct: 421 EEDLRPALADIVWVWQGE 438
>ref|NP_199394.1| serine threonine protein kinase; protein id: At5g45820.1, supported
by cDNA: gi_14486383 [Arabidopsis thaliana]
gi|9758929|dbj|BAB09310.1| serine/threonine protein
kinase [Arabidopsis thaliana] gi|14486384|gb|AAK61493.1|
CBL-interacting protein kinase 20 [Arabidopsis thaliana]
Length = 439
Score = 38.5 bits (88), Expect = 0.047
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 518 FCEEDVRPALKDIVWTWQG 462
FC+ ++RP+LKDIVW WQG
Sbjct: 407 FCDRELRPSLKDIVWKWQG 425
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,471,421
Number of Sequences: 1393205
Number of extensions: 7980824
Number of successful extensions: 15998
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 15654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15994
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
