Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002673A_C02 KMC002673A_c02
(650 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199565.1| putative protein; protein id: At5g47540.1 [Arab... 163 2e-39
sp|Q9FGK3|MO2N_ARATH Hypothetical MO25-like protein At5g47540 gi... 163 2e-39
pir||G71441 hypothetical protein - Arabidopsis thaliana gi|22450... 146 3e-34
ref|NP_193460.1| putative protein; protein id: At4g17270.1, supp... 146 3e-34
dbj|BAC22269.1| putative MO25 protein (CGI-66) [Oryza sativa (ja... 134 8e-31
>ref|NP_199565.1| putative protein; protein id: At5g47540.1 [Arabidopsis thaliana]
Length = 344
Score = 163 bits (413), Expect = 2e-39
Identities = 83/97 (85%), Positives = 93/97 (95%)
Frame = -2
Query: 649 ERSNSAVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIISILVTN 470
+RSNSAVMT+YVSSR+NLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADI++ILV N
Sbjct: 245 DRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVNILVAN 304
Query: 469 RSKLLRLLGDLKIEKEDEPFEADKAQVMKEIAALEPK 359
RSKLLRLL DLK +KEDE FEADK+QV++EIAALEP+
Sbjct: 305 RSKLLRLLADLKPDKEDERFEADKSQVLREIAALEPR 341
>sp|Q9FGK3|MO2N_ARATH Hypothetical MO25-like protein At5g47540 gi|9758782|dbj|BAB09080.1|
emb|CAB78730.1~gene_id:MNJ7.13~similar to unknown
protein [Arabidopsis thaliana]
gi|16226301|gb|AAL16128.1|AF428296_1 AT5g47540/MNJ7_13
[Arabidopsis thaliana]
Length = 343
Score = 163 bits (413), Expect = 2e-39
Identities = 83/97 (85%), Positives = 93/97 (95%)
Frame = -2
Query: 649 ERSNSAVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIISILVTN 470
+RSNSAVMT+YVSSR+NLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADI++ILV N
Sbjct: 244 DRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVNILVAN 303
Query: 469 RSKLLRLLGDLKIEKEDEPFEADKAQVMKEIAALEPK 359
RSKLLRLL DLK +KEDE FEADK+QV++EIAALEP+
Sbjct: 304 RSKLLRLLADLKPDKEDERFEADKSQVLREIAALEPR 340
>pir||G71441 hypothetical protein - Arabidopsis thaliana
gi|2245086|emb|CAB10508.1| hypothetical protein
[Arabidopsis thaliana]
Length = 305
Score = 146 bits (368), Expect = 3e-34
Identities = 74/95 (77%), Positives = 87/95 (90%)
Frame = -2
Query: 649 ERSNSAVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIISILVTN 470
+RSNSAVMT+YVSS +NLRILMNLLRESSK+IQIEAFHVFKLF ANQNKP+DI +ILV N
Sbjct: 206 DRSNSAVMTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFVANQNKPSDIANILVAN 265
Query: 469 RSKLLRLLGDLKIEKEDEPFEADKAQVMKEIAALE 365
R+KLLRLL D+K +KEDE F+ADKAQV++EIA L+
Sbjct: 266 RNKLLRLLADIKPDKEDERFDADKAQVVREIANLK 300
>ref|NP_193460.1| putative protein; protein id: At4g17270.1, supported by cDNA:
gi_14190518, supported by cDNA: gi_15810066 [Arabidopsis
thaliana] gi|15214078|sp|Q9M0M4|MO2M_ARATH Hypothetical
MO25-like protein At4g17270 gi|7268479|emb|CAB78730.1|
putative protein [Arabidopsis thaliana]
gi|14190519|gb|AAK55740.1|AF380659_1 AT4g17270/dl4670w
[Arabidopsis thaliana] gi|15810067|gb|AAL06959.1|
AT4g17270/dl4670w [Arabidopsis thaliana]
Length = 343
Score = 146 bits (368), Expect = 3e-34
Identities = 74/95 (77%), Positives = 87/95 (90%)
Frame = -2
Query: 649 ERSNSAVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIISILVTN 470
+RSNSAVMT+YVSS +NLRILMNLLRESSK+IQIEAFHVFKLF ANQNKP+DI +ILV N
Sbjct: 244 DRSNSAVMTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFVANQNKPSDIANILVAN 303
Query: 469 RSKLLRLLGDLKIEKEDEPFEADKAQVMKEIAALE 365
R+KLLRLL D+K +KEDE F+ADKAQV++EIA L+
Sbjct: 304 RNKLLRLLADIKPDKEDERFDADKAQVVREIANLK 338
>dbj|BAC22269.1| putative MO25 protein (CGI-66) [Oryza sativa (japonica
cultivar-group)]
Length = 333
Score = 134 bits (338), Expect = 8e-31
Identities = 69/94 (73%), Positives = 82/94 (86%)
Frame = -2
Query: 649 ERSNSAVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIISILVTN 470
+RSNS VM RYVSS++NL ILMNLLR+SSK+IQIEAFHVFKLFAAN+NKP ++++ILVTN
Sbjct: 241 DRSNSTVMMRYVSSKDNLMILMNLLRDSSKNIQIEAFHVFKLFAANKNKPTEVVNILVTN 300
Query: 469 RSKLLRLLGDLKIEKEDEPFEADKAQVMKEIAAL 368
RSKLLR KI+K DE FEADK QV+KEI+AL
Sbjct: 301 RSKLLRFFAGFKIDK-DEQFEADKEQVIKEISAL 333
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,818,502
Number of Sequences: 1393205
Number of extensions: 8242122
Number of successful extensions: 22215
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 21717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22209
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
