Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002658A_C01 KMC002658A_c01
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max] 67 1e-10
ref|NP_195185.1| bZIP family transcription factor; protein id: A... 53 3e-06
emb|CAA68078.1| bZIP transcription factor [Arabidopsis thaliana]... 52 4e-06
ref|NP_177672.1| bZIP transcription factor ATB2, putative; prote... 45 7e-04
gb|AAK92213.1| bZIP transcription factor BZI-2 [Nicotiana tabacum] 41 0.010
>gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max]
Length = 166
Score = 67.4 bits (163), Expect = 1e-10
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 17/75 (22%)
Frame = -3
Query: 586 VLSAQMGELSHRLESLNEIIDFVNATN-----GVFAANSFVDPIP------------SAY 458
VL AQ+GELSHRLESLNEI+D +NAT G A+++FV+P+ +
Sbjct: 92 VLRAQVGELSHRLESLNEIVDVLNATTTVAGFGAAASSTFVEPMNNNNNSFFNFNPLNMG 151
Query: 457 YLNHPIMASADILQY 413
YLN PIMASADILQY
Sbjct: 152 YLNQPIMASADILQY 166
>ref|NP_195185.1| bZIP family transcription factor; protein id: At4g34590.1
[Arabidopsis thaliana] gi|7488379|pir||T05279
transcription factor ATB2 - Arabidopsis thaliana
gi|3096928|emb|CAA18838.1| bZIP transcription factor
ATB2 [Arabidopsis thaliana] gi|7270409|emb|CAB80176.1|
bZIP transcription factor ATB2 [Arabidopsis thaliana]
gi|17381046|gb|AAL36335.1| putative bZIP transcription
factor ATB2 [Arabidopsis thaliana]
gi|20465863|gb|AAM20036.1| putative bZIP transcription
factor ATB2 [Arabidopsis thaliana]
Length = 159
Score = 52.8 bits (125), Expect = 3e-06
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 15/73 (20%)
Frame = -3
Query: 586 VLSAQMGELSHRLESLNEIIDFVNATN---------------GVFAANSFVDPIPSAYYL 452
VL AQ+ EL+HRL+SLN+II+F++++N G+ + FV+ + +Y +
Sbjct: 87 VLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNMGMCSNPLVGLECDDFFVNQMNMSYIM 146
Query: 451 NHPIMASADILQY 413
N P+MAS+D L Y
Sbjct: 147 NQPLMASSDALMY 159
>emb|CAA68078.1| bZIP transcription factor [Arabidopsis thaliana]
gi|1865679|emb|CAB04795.1| ATB2 [Arabidopsis thaliana]
gi|10443483|gb|AAG17475.1|AF053940_1 transcription
factor GBF6 [Arabidopsis thaliana]
Length = 160
Score = 52.4 bits (124), Expect = 4e-06
Identities = 28/74 (37%), Positives = 45/74 (59%), Gaps = 16/74 (21%)
Frame = -3
Query: 586 VLSAQMGELSHRLESLNEIIDFVNATN----------------GVFAANSFVDPIPSAYY 455
VL AQ+ EL+HRL+SLN+II+F++++N G+ + FV+ + +Y
Sbjct: 87 VLRAQLDELNHRLQSLNDIIEFLDSSNNNNNNNNMGMCSNPLVGLECDDFFVNQMNMSYI 146
Query: 454 LNHPIMASADILQY 413
+N P+MAS+D L Y
Sbjct: 147 MNQPLMASSDALMY 160
>ref|NP_177672.1| bZIP transcription factor ATB2, putative; protein id: At1g75390.1
[Arabidopsis thaliana] gi|25345497|pir||D96784
hypothetical protein F1B16.8 [imported] - Arabidopsis
thaliana gi|10120439|gb|AAG13064.1|AC023754_2 similar to
DNA-binding protein [Arabidopsis thaliana]
gi|28466851|gb|AAO44034.1| At1g75390 [Arabidopsis
thaliana]
Length = 167
Score = 45.1 bits (105), Expect = 7e-04
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 12/65 (18%)
Frame = -3
Query: 586 VLSAQMGELSHRLESLNEIIDFVNATN---------GVFAANSF---VDPIPSAYYLNHP 443
+L AQ+ EL+HRL+SLNEI+DFV +++ G+F F ++P+ +Y N P
Sbjct: 95 ILRAQVLELNHRLQSLNEIVDFVESSSSGFGMETGQGLFDGGLFDGVMNPMNLGFY-NQP 153
Query: 442 IMASA 428
IMASA
Sbjct: 154 IMASA 158
>gb|AAK92213.1| bZIP transcription factor BZI-2 [Nicotiana tabacum]
Length = 170
Score = 41.2 bits (95), Expect = 0.010
Identities = 31/84 (36%), Positives = 42/84 (49%), Gaps = 26/84 (30%)
Frame = -3
Query: 586 VLSAQMGELSHRLESLNEIIDFVNATNGV-----------------FAANSFVDPIPSAY 458
+L AQ+ EL+HRLESLNEII F++A N FA N +P+ +
Sbjct: 91 ILRAQLAELNHRLESLNEIIAFLDANNNCNGLANMDHNQEEPYSFNFAQN---EPMVDGF 147
Query: 457 YL---------NHPIMASADILQY 413
+ N PIM +AD+LQY
Sbjct: 148 NMTNSWNYLCANQPIM-TADVLQY 170
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 499,921,001
Number of Sequences: 1393205
Number of extensions: 10574143
Number of successful extensions: 25594
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25574
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
