Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002633A_C01 KMC002633A_c01
(607 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S71923 cysteine proteinase (EC 3.4.22.-) - garden pea gi|11... 257 3e-71
emb|CAC41636.1| early leaf senescence abundant cysteine protease... 256 5e-71
gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis th... 224 8e-59
ref|NP_568921.1| cysteine proteinase AALP; protein id: At5g60360... 224 8e-59
gb|AAB97142.1| cysteine protease [Prunus armeniaca] 221 1e-58
>pir||S71923 cysteine proteinase (EC 3.4.22.-) - garden pea
gi|1134882|emb|CAA92583.1| cysteine protease [Pisum
sativum]
Length = 350
Score = 257 bits (656), Expect(2) = 3e-71
Identities = 122/156 (78%), Positives = 144/156 (92%)
Frame = +2
Query: 140 LRLVSDLEEQVLQVIGQTRHALSFARFATRYGKRYDSVEEIQHRFRIFSESLELIKSTNK 319
+R+VSD+EEQ+LQVIG++RHA+SFARFA RYGKRYDSV+E++ RF+IFSE+LELI+S+NK
Sbjct: 28 IRMVSDVEEQLLQVIGESRHAVSFARFANRYGKRYDSVDEMKLRFKIFSENLELIRSSNK 87
Query: 320 KRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKESIVSE 499
+RLSYKLG+NHFAD +W+EFR+ +LGAAQNCSATL GNHK+TDA LP EKDWRKE IVS
Sbjct: 88 RRLSYKLGVNHFADWTWEEFRSHRLGAAQNCSATLKGNHKITDANLPDEKDWRKEGIVSG 147
Query: 500 VKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQ 607
VKDQ CGSCWTFSTTGALE+AYAQA GKNISLSEQ
Sbjct: 148 VKDQGSCGSCWTFSTTGALESAYAQAFGKNISLSEQ 183
Score = 33.9 bits (76), Expect(2) = 3e-71
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 52 MARWSLLLLTVVLGVAAAAGSSSFEDSNPI 141
MA+WSLL+ V+ VA+AA SF DSNPI
Sbjct: 1 MAQWSLLI--VLFCVASAAAGFSFHDSNPI 28
>emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
Length = 350
Score = 256 bits (654), Expect(2) = 5e-71
Identities = 121/156 (77%), Positives = 144/156 (91%)
Frame = +2
Query: 140 LRLVSDLEEQVLQVIGQTRHALSFARFATRYGKRYDSVEEIQHRFRIFSESLELIKSTNK 319
+R+VSD+EEQ+LQVIG++RHA+SFARFA RYGKRYDSV+E++ RF+IFSE++ELI+S+NK
Sbjct: 28 IRMVSDVEEQLLQVIGESRHAVSFARFANRYGKRYDSVDEMKLRFKIFSENIELIRSSNK 87
Query: 320 KRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKESIVSE 499
+RLSYKLG+NHFAD +W+EFR+ +LGAAQNCSATL GNHK+TDA LP EKDWRKE IVS
Sbjct: 88 RRLSYKLGVNHFADWTWEEFRSHRLGAAQNCSATLKGNHKITDANLPDEKDWRKEGIVSG 147
Query: 500 VKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQ 607
VKDQ CGSCWTFSTTGALE+AYAQA GKNISLSEQ
Sbjct: 148 VKDQGSCGSCWTFSTTGALESAYAQAFGKNISLSEQ 183
Score = 33.9 bits (76), Expect(2) = 5e-71
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 52 MARWSLLLLTVVLGVAAAAGSSSFEDSNPI 141
MA+WSLL+ V+ VA+AA SF DSNPI
Sbjct: 1 MAQWSLLI--VLFCVASAAAGFSFHDSNPI 28
>gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
Length = 358
Score = 224 bits (571), Expect(2) = 8e-59
Identities = 110/160 (68%), Positives = 131/160 (81%), Gaps = 4/160 (2%)
Frame = +2
Query: 140 LRLVSD----LEEQVLQVIGQTRHALSFARFATRYGKRYDSVEEIQHRFRIFSESLELIK 307
+R+VSD +EE V Q++GQ+RH LSFARF RYGK+Y +VEE++ RF IF E+L+LI+
Sbjct: 32 IRMVSDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIR 91
Query: 308 STNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKES 487
STNKK LSYKLG+N FADL+W EF+ KLGAAQNCSATL G+HK+T+A LP KDWR++
Sbjct: 92 STNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPETKDWREDG 151
Query: 488 IVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQ 607
IVS VKDQ CGSCWTFSTTGALEAAY QA GK ISLSEQ
Sbjct: 152 IVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQ 191
Score = 25.0 bits (53), Expect(2) = 8e-59
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 73 LLTVVLGVAAAAGSSSFEDSNPI 141
++ VVL A+AA + F++SNPI
Sbjct: 10 VVLVVLFAASAAANIGFDESNPI 32
>ref|NP_568921.1| cysteine proteinase AALP; protein id: At5g60360.1, supported by
cDNA: 8989., supported by cDNA: gi_13430721, supported
by cDNA: gi_7230639 [Arabidopsis thaliana]
gi|7230640|gb|AAF43041.1|AF233883_1 AALP protein
[Arabidopsis thaliana] gi|9757740|dbj|BAB08221.1| AALP
protein [Arabidopsis thaliana]
gi|13430722|gb|AAK25983.1|AF360273_1 putative cysteine
proteinase AALP [Arabidopsis thaliana]
gi|21617934|gb|AAM66984.1| cysteine proteinase AALP
[Arabidopsis thaliana] gi|23397068|gb|AAN31819.1|
putative cysteine proteinase AALP [Arabidopsis thaliana]
gi|23397074|gb|AAN31822.1| putative cysteine proteinase
AALP [Arabidopsis thaliana] gi|24417304|gb|AAN60262.1|
unknown [Arabidopsis thaliana]
Length = 358
Score = 224 bits (571), Expect(2) = 8e-59
Identities = 110/160 (68%), Positives = 131/160 (81%), Gaps = 4/160 (2%)
Frame = +2
Query: 140 LRLVSD----LEEQVLQVIGQTRHALSFARFATRYGKRYDSVEEIQHRFRIFSESLELIK 307
+R+VSD +EE V Q++GQ+RH LSFARF RYGK+Y +VEE++ RF IF E+L+LI+
Sbjct: 32 IRMVSDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIR 91
Query: 308 STNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKES 487
STNKK LSYKLG+N FADL+W EF+ KLGAAQNCSATL G+HK+T+A LP KDWR++
Sbjct: 92 STNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPETKDWREDG 151
Query: 488 IVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQ 607
IVS VKDQ CGSCWTFSTTGALEAAY QA GK ISLSEQ
Sbjct: 152 IVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQ 191
Score = 25.0 bits (53), Expect(2) = 8e-59
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 73 LLTVVLGVAAAAGSSSFEDSNPI 141
++ VVL A+AA + F++SNPI
Sbjct: 10 VVLVVLVAASAAANIGFDESNPI 32
>gb|AAB97142.1| cysteine protease [Prunus armeniaca]
Length = 358
Score = 221 bits (563), Expect(2) = 1e-58
Identities = 110/160 (68%), Positives = 131/160 (81%), Gaps = 4/160 (2%)
Frame = +2
Query: 140 LRLVSD----LEEQVLQVIGQTRHALSFARFATRYGKRYDSVEEIQHRFRIFSESLELIK 307
+RLVSD LE+QV+QV+G +R AL FARFA RYGK+Y+SVEE++ R+ IFSE+ +LI+
Sbjct: 32 IRLVSDGLRELEQQVVQVLGNSRRALHFARFAHRYGKKYESVEEMKLRYEIFSENKKLIR 91
Query: 308 STNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKES 487
STNKK L Y L +N FAD SW+EFR Q+LGAAQNCSAT G+H+LTDAVLP K+WR+E
Sbjct: 92 STNKKGLPYTLAVNRFADWSWEEFRRQRLGAAQNCSATTKGSHELTDAVLPESKNWREEG 151
Query: 488 IVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQ 607
IV+ VKDQ HCGSCWTFSTTGALEAAY QA K ISLSEQ
Sbjct: 152 IVTPVKDQGHCGSCWTFSTTGALEAAYVQAFRKQISLSEQ 191
Score = 27.7 bits (60), Expect(2) = 1e-58
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 52 MARWSLLLLT--VVLGVAAAAGSSSFEDSNPI 141
MAR +L+L V++ ++ A +SSF++SNPI
Sbjct: 1 MARVTLVLSAALVLVAISCGAAASSFDESNPI 32
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,980,381
Number of Sequences: 1393205
Number of extensions: 10620369
Number of successful extensions: 38145
Number of sequences better than 10.0: 922
Number of HSP's better than 10.0 without gapping: 35838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37539
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
