Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002616A_C01 KMC002616A_c01
(698 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_683329.1| adenine phosphoribosyltransferase 1, APRT; prot... 112 5e-24
pir||G86399 protein F17L21.24 [imported] - Arabidopsis thaliana ... 112 5e-24
ref|NP_564284.1| adenine phosphoribosyltransferase 1, APRT; prot... 112 5e-24
emb|CAA77094.1| MtN30 [Medicago truncatula] 106 4e-22
ref|NP_193988.1| adenine phosphoribosyltransferase (EC 2.4.2.7) ... 102 4e-21
>ref|NP_683329.1| adenine phosphoribosyltransferase 1, APRT; protein id: At1g27450.2,
supported by cDNA: gi_13358234, supported by cDNA:
gi_16163 [Arabidopsis thaliana]
gi|399046|sp|P31166|APT1_ARATH Adenine
phosphoribosyltransferase 1 (APRT) gi|99657|pir||S20867
adenine phosphoribosyltransferase (EC 2.4.2.7) 1
[similarity] - Arabidopsis thaliana
gi|16164|emb|CAA41497.1| adenine
phosphoribosyltransferase [Arabidopsis thaliana]
gi|433050|gb|AAA20677.1| adenine
phosphoribosyltransferase
gi|11762238|gb|AAG40397.1|AF325045_1 At1g27450
[Arabidopsis thaliana] gi|22135996|gb|AAM91580.1|
adenine phosphoribosyltransferase 1, APRT [Arabidopsis
thaliana] gi|23198324|gb|AAN15689.1| adenine
phosphoribosyltransferase 1, APRT [Arabidopsis thaliana]
Length = 183
Score = 112 bits (280), Expect = 5e-24
Identities = 55/70 (78%), Positives = 64/70 (90%)
Frame = -2
Query: 697 EMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVPVVECACVIELPELKGRERLGD 518
EMHVGAV+ GERA+IIDDLIATGGTL+AAIRLLERV V +VECACVIELPELKG+E+LG+
Sbjct: 113 EMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGE 172
Query: 517 KALFVLVNGS 488
+LFVLV +
Sbjct: 173 TSLFVLVKSA 182
>pir||G86399 protein F17L21.24 [imported] - Arabidopsis thaliana
gi|9802535|gb|AAF99737.1|AC004557_16 F17L21.24
[Arabidopsis thaliana]
Length = 223
Score = 112 bits (280), Expect = 5e-24
Identities = 55/70 (78%), Positives = 64/70 (90%)
Frame = -2
Query: 697 EMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVPVVECACVIELPELKGRERLGD 518
EMHVGAV+ GERA+IIDDLIATGGTL+AAIRLLERV V +VECACVIELPELKG+E+LG+
Sbjct: 153 EMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGE 212
Query: 517 KALFVLVNGS 488
+LFVLV +
Sbjct: 213 TSLFVLVKSA 222
>ref|NP_564284.1| adenine phosphoribosyltransferase 1, APRT; protein id: At1g27450.1,
supported by cDNA: 102971. [Arabidopsis thaliana]
gi|21536559|gb|AAM60891.1| adenine
phosphoribosyltransferase 1, APRT [Arabidopsis thaliana]
Length = 243
Score = 112 bits (280), Expect = 5e-24
Identities = 55/70 (78%), Positives = 64/70 (90%)
Frame = -2
Query: 697 EMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVPVVECACVIELPELKGRERLGD 518
EMHVGAV+ GERA+IIDDLIATGGTL+AAIRLLERV V +VECACVIELPELKG+E+LG+
Sbjct: 173 EMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGE 232
Query: 517 KALFVLVNGS 488
+LFVLV +
Sbjct: 233 TSLFVLVKSA 242
>emb|CAA77094.1| MtN30 [Medicago truncatula]
Length = 141
Score = 106 bits (264), Expect = 4e-22
Identities = 52/67 (77%), Positives = 58/67 (85%)
Frame = -2
Query: 697 EMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVPVVECACVIELPELKGRERLGD 518
EMHVGAV+ GERA+++DDLIATGGTL AA+ LLERV VVECACVIELPELKGRERL
Sbjct: 70 EMHVGAVETGERAIVVDDLIATGGTLGAAMNLLERVGAEVVECACVIELPELKGRERLNG 129
Query: 517 KALFVLV 497
K L+VLV
Sbjct: 130 KPLYVLV 136
>ref|NP_193988.1| adenine phosphoribosyltransferase (EC 2.4.2.7) - like protein;
protein id: At4g22570.1, supported by cDNA: 11009.
[Arabidopsis thaliana] gi|7433929|pir||T05451 adenine
phosphoribosyltransferase (EC 2.4.2.7) F7K2.150 -
Arabidopsis thaliana gi|3892712|emb|CAA22162.1| adenine
phosphoribosyltransferase (EC 2.4.2.7)-like protein
[Arabidopsis thaliana] gi|7269103|emb|CAB79212.1|
adenine phosphoribosyltransferase (EC 2.4.2.7)-like
protein [Arabidopsis thaliana]
gi|27754669|gb|AAO22778.1| putative adenine
phosphoribosyltransferase [Arabidopsis thaliana]
gi|28393997|gb|AAO42406.1| putative adenine
phosphoribosyltransferase [Arabidopsis thaliana]
Length = 183
Score = 102 bits (255), Expect = 4e-21
Identities = 51/67 (76%), Positives = 58/67 (86%)
Frame = -2
Query: 697 EMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVPVVECACVIELPELKGRERLGD 518
EMH+GAV+AG+RAL++DDLIATGGTL AAI LLERV VVECACVIELPELKGR+RL
Sbjct: 114 EMHIGAVEAGDRALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPELKGRQRLKG 173
Query: 517 KALFVLV 497
K L +LV
Sbjct: 174 KPLCMLV 180
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 577,668,779
Number of Sequences: 1393205
Number of extensions: 12180669
Number of successful extensions: 26043
Number of sequences better than 10.0: 297
Number of HSP's better than 10.0 without gapping: 24929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25944
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31967457276
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
