Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002596A_C01 KMC002596A_c01
(509 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190735.1| putative protein; protein id: At3g51670.1, supp... 39 0.035
ref|NP_564360.1| expressed protein; protein id: At1g30690.1, sup... 36 0.29
gb|AAK59666.1| unknown protein [Arabidopsis thaliana] 36 0.29
emb|CAB95829.1| hypothetical protein [Cicer arietinum] 35 0.66
ref|NP_173669.1| unknown protein; protein id: At1g22530.1 [Arabi... 32 3.3
>ref|NP_190735.1| putative protein; protein id: At3g51670.1, supported by cDNA:
gi_16930482 [Arabidopsis thaliana]
gi|11358091|pir||T46063 hypothetical protein T18N14.50 -
Arabidopsis thaliana gi|6580149|emb|CAB63153.1| putative
protein [Arabidopsis thaliana]
gi|16930483|gb|AAL31927.1|AF419595_1 AT3g51670/T18N14_50
[Arabidopsis thaliana] gi|25141223|gb|AAN73306.1|
At3g51670/T18N14_50 [Arabidopsis thaliana]
Length = 409
Score = 38.9 bits (89), Expect = 0.035
Identities = 17/27 (62%), Positives = 23/27 (84%)
Frame = -1
Query: 347 ADVILLKIIRTRDFRVSEALNILLKCL 267
ADVILLK +R RDF+V+++L +L KCL
Sbjct: 81 ADVILLKFLRARDFKVADSLRMLEKCL 107
>ref|NP_564360.1| expressed protein; protein id: At1g30690.1, supported by cDNA:
gi_14334977 [Arabidopsis thaliana]
gi|25518522|pir||D86432 hypothetical protein T5I8.14 -
Arabidopsis thaliana
gi|4587525|gb|AAD25756.1|AC007060_14 Contains the
PF|00650 CRAL/TRIO phosphatidyl-inositol-transfer
protein domain. ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene. [Arabidopsis thaliana]
gi|24030399|gb|AAN41359.1| unknown protein [Arabidopsis
thaliana]
Length = 540
Score = 35.8 bits (81), Expect = 0.29
Identities = 17/30 (56%), Positives = 22/30 (72%)
Frame = -1
Query: 356 AMTADVILLKIIRTRDFRVSEALNILLKCL 267
A + DVILLK +R RDF+V+EA +L K L
Sbjct: 216 AESTDVILLKFLRARDFKVNEAFEMLKKTL 245
>gb|AAK59666.1| unknown protein [Arabidopsis thaliana]
Length = 540
Score = 35.8 bits (81), Expect = 0.29
Identities = 17/30 (56%), Positives = 22/30 (72%)
Frame = -1
Query: 356 AMTADVILLKIIRTRDFRVSEALNILLKCL 267
A + DVILLK +R RDF+V+EA +L K L
Sbjct: 216 AESTDVILLKFLRARDFKVNEAFEMLKKTL 245
>emb|CAB95829.1| hypothetical protein [Cicer arietinum]
Length = 482
Score = 34.7 bits (78), Expect = 0.66
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Frame = -1
Query: 347 ADVILLKIIRTRDFRVSEALNILLKCLVL---------------TAWHHRGRRFWSSMSF 213
+DVILLK +R RDF+V EA ++ + ++ T W G W + F
Sbjct: 149 SDVILLKFLRARDFKVKEAFTMIKQTVIWRKEFGIEGLLQEDLGTDWEDLGTD-WDKVVF 207
Query: 212 KEGYVK 195
+GY K
Sbjct: 208 TDGYDK 213
>ref|NP_173669.1| unknown protein; protein id: At1g22530.1 [Arabidopsis thaliana]
gi|25511657|pir||E86358 F12K8.13 protein - Arabidopsis
thaliana gi|6587836|gb|AAF18525.1|AC006551_11 Unknown
protein [Arabidopsis thaliana]
gi|20268782|gb|AAM14094.1| unknown protein [Arabidopsis
thaliana] gi|22136800|gb|AAM91744.1| unknown protein
[Arabidopsis thaliana]
Length = 683
Score = 32.3 bits (72), Expect = 3.3
Identities = 14/23 (60%), Positives = 18/23 (77%)
Frame = -1
Query: 347 ADVILLKIIRTRDFRVSEALNIL 279
+DVILLK +R RDF+V EA +L
Sbjct: 364 SDVILLKFLRARDFKVKEAFTML 386
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 386,219,211
Number of Sequences: 1393205
Number of extensions: 7411905
Number of successful extensions: 14203
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14202
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
