Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002574A_C01 KMC002574A_c01
(546 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC20708.1| putative translational inhibitor protein [Oryza ... 138 4e-32
ref|NP_188674.1| translational inhibitor protein, putative; prot... 134 5e-31
dbj|BAB02821.1| contains similarity to protein translation inhib... 134 5e-31
ref|NP_005827.1| translational inhibitor protein p14.5 [Homo sap... 101 7e-21
ref|NP_741178.1| YjgF family (15.2 kD) [Caenorhabditis elegans] ... 96 3e-19
>dbj|BAC20708.1| putative translational inhibitor protein [Oryza sativa (japonica
cultivar-group)]
Length = 180
Score = 138 bits (348), Expect = 4e-32
Identities = 67/80 (83%), Positives = 78/80 (96%)
Frame = -1
Query: 534 GEFISDNVEEQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSP 355
G+F+S++VEEQTEQ++KNMGEILKA GASYSSVVKTTIMLADL+DFKKVNEIYAKYFP+P
Sbjct: 95 GKFVSESVEEQTEQVMKNMGEILKASGASYSSVVKTTIMLADLQDFKKVNEIYAKYFPAP 154
Query: 354 FPARSTYQVAALPLDAKIEM 295
PARSTYQVAALPL+A+IE+
Sbjct: 155 APARSTYQVAALPLNARIEI 174
>ref|NP_188674.1| translational inhibitor protein, putative; protein id: At3g20390.1,
supported by cDNA: 20767., supported by cDNA:
gi_14030710, supported by cDNA: gi_16974536 [Arabidopsis
thaliana] gi|14030711|gb|AAK53030.1|AF375446_1
AT3g20390/MQC12_15 [Arabidopsis thaliana]
gi|16974537|gb|AAL31178.1| AT3g20390/MQC12_15
[Arabidopsis thaliana] gi|21554167|gb|AAM63246.1|
translational inhibitor protein, putative [Arabidopsis
thaliana]
Length = 187
Score = 134 bits (338), Expect = 5e-31
Identities = 66/80 (82%), Positives = 75/80 (93%)
Frame = -1
Query: 534 GEFISDNVEEQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSP 355
G+F+S++VE+QTEQ+LKNMGEILKA GA YSSVVKTTIMLADL DFK VNEIYAKYFP+P
Sbjct: 102 GKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAP 161
Query: 354 FPARSTYQVAALPLDAKIEM 295
PARSTYQVAALPL+AKIE+
Sbjct: 162 SPARSTYQVAALPLNAKIEI 181
>dbj|BAB02821.1| contains similarity to protein translation
inhibitor~gene_id:MQC12.17 [Arabidopsis thaliana]
Length = 143
Score = 134 bits (338), Expect = 5e-31
Identities = 66/80 (82%), Positives = 75/80 (93%)
Frame = -1
Query: 534 GEFISDNVEEQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSP 355
G+F+S++VE+QTEQ+LKNMGEILKA GA YSSVVKTTIMLADL DFK VNEIYAKYFP+P
Sbjct: 58 GKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAP 117
Query: 354 FPARSTYQVAALPLDAKIEM 295
PARSTYQVAALPL+AKIE+
Sbjct: 118 SPARSTYQVAALPLNAKIEI 137
>ref|NP_005827.1| translational inhibitor protein p14.5 [Homo sapiens]
gi|1717975|sp|P52758|UK14_HUMAN 14.5 kDa translational
inhibitor protein (p14.5) (UK114 antigen homolog)
gi|1177435|emb|CAA64670.1| 14.5 kDa translational
inhibitor protein, p14.5 [Homo sapiens]
gi|12751539|gb|AAK01939.1| perchloric-acid-soluble
translational inhibitor p14.5 [Homo sapiens]
gi|15214909|gb|AAH12592.1|AAH12592 Similar to
translational inhibitor protein p14.5 [Homo sapiens]
gi|16307463|gb|AAH10280.1|AAH10280 translational
inhibitor protein p14.5 [Homo sapiens]
Length = 137
Score = 101 bits (251), Expect = 7e-21
Identities = 47/80 (58%), Positives = 62/80 (76%)
Frame = -1
Query: 534 GEFISDNVEEQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSP 355
G+ +S V E+ +Q LKNMGEILKA G +++VVKTT++LAD+ DF VNEIY +YF S
Sbjct: 44 GQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSN 103
Query: 354 FPARSTYQVAALPLDAKIEM 295
FPAR+ YQVAALP ++IE+
Sbjct: 104 FPARAAYQVAALPKGSRIEI 123
>ref|NP_741178.1| YjgF family (15.2 kD) [Caenorhabditis elegans]
gi|20451193|gb|AAM22035.1|U39851_6 Hypothetical protein
C23G10.2b [Caenorhabditis elegans]
Length = 144
Score = 95.9 bits (237), Expect = 3e-19
Identities = 43/77 (55%), Positives = 58/77 (74%)
Frame = -1
Query: 525 ISDNVEEQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPA 346
+ + V EQT Q LKN+GE+LKA GA Y +VVKTT++L ++ DF VNE+Y +YF SP+PA
Sbjct: 54 LKEGVVEQTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPA 113
Query: 345 RSTYQVAALPLDAKIEM 295
R+ YQVAALP +E+
Sbjct: 114 RAAYQVAALPKGGLVEI 130
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 436,613,277
Number of Sequences: 1393205
Number of extensions: 8619199
Number of successful extensions: 22086
Number of sequences better than 10.0: 256
Number of HSP's better than 10.0 without gapping: 21625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22056
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
