Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002570A_C01 KMC002570A_c01
(417 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564618.1| expressed protein; protein id: At1g52930.1, sup... 73 7e-13
gb|AAL25537.1| AT3g15460/MJK13_12 [Arabidopsis thaliana] gi|2350... 71 4e-12
ref|NP_566514.1| expressed protein; protein id: At3g15460.1, sup... 71 4e-12
ref|NP_705488.1| guanylyl cyclase [Plasmodium falciparum 3D7] gi... 32 2.4
emb|CAC05389.1| guanylyl cyclase enzyme [Plasmodium falciparum] 32 2.4
>ref|NP_564618.1| expressed protein; protein id: At1g52930.1, supported by cDNA:
gi_13878054, supported by cDNA: gi_17104646 [Arabidopsis
thaliana] gi|25309828|pir||F96570 unknown protein,
80333-82175 [imported] - Arabidopsis thaliana
gi|12324636|gb|AAG52272.1|AC019018_9 unknown protein;
80333-82175 [Arabidopsis thaliana]
gi|13878055|gb|AAK44105.1|AF370290_1 unknown protein
[Arabidopsis thaliana] gi|17104647|gb|AAL34212.1|
unknown protein [Arabidopsis thaliana]
Length = 320
Score = 73.2 bits (178), Expect = 7e-13
Identities = 31/35 (88%), Positives = 35/35 (99%)
Frame = -2
Query: 413 KAGKFAKKVKAKTRRKMHEMANPLEPDEFADMWKD 309
KAGKFAKK+KAKTR+KMHE++NPLEPDEFADMWKD
Sbjct: 284 KAGKFAKKIKAKTRKKMHELSNPLEPDEFADMWKD 318
>gb|AAL25537.1| AT3g15460/MJK13_12 [Arabidopsis thaliana]
gi|23505881|gb|AAN28800.1| At3g15460/MJK13_12
[Arabidopsis thaliana]
Length = 315
Score = 70.9 bits (172), Expect = 4e-12
Identities = 30/35 (85%), Positives = 33/35 (93%)
Frame = -2
Query: 413 KAGKFAKKVKAKTRRKMHEMANPLEPDEFADMWKD 309
KAGKFAKK+KAKTRRKMHE++NPLEPDEF DMW D
Sbjct: 280 KAGKFAKKIKAKTRRKMHELSNPLEPDEFTDMWND 314
>ref|NP_566514.1| expressed protein; protein id: At3g15460.1, supported by cDNA:
2356., supported by cDNA: gi_16648688 [Arabidopsis
thaliana] gi|7021731|gb|AAF35412.1| unknown protein
[Arabidopsis thaliana] gi|15795111|dbj|BAB02375.1|
contains similarity to unknown
protein~gb|AAF30341.1~gene_id:MJK13.12 [Arabidopsis
thaliana] gi|21592419|gb|AAM64370.1| unknown
[Arabidopsis thaliana]
Length = 315
Score = 70.9 bits (172), Expect = 4e-12
Identities = 30/35 (85%), Positives = 33/35 (93%)
Frame = -2
Query: 413 KAGKFAKKVKAKTRRKMHEMANPLEPDEFADMWKD 309
KAGKFAKK+KAKTRRKMHE++NPLEPDEF DMW D
Sbjct: 280 KAGKFAKKIKAKTRRKMHELSNPLEPDEFTDMWND 314
>ref|NP_705488.1| guanylyl cyclase [Plasmodium falciparum 3D7]
gi|23615733|emb|CAD52725.1| guanylyl cyclase [Plasmodium
falciparum 3D7]
Length = 3127
Score = 31.6 bits (70), Expect = 2.4
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1
Query: 174 ELLFINTMIFSMKGSFFL*FHV-IFFNFARVFPIH 73
+L+FI M+F K FF+ F++ + ++F+++F IH
Sbjct: 2858 QLIFIKNMLFKHKFFFFVFFYIFLIYSFSKLFSIH 2892
>emb|CAC05389.1| guanylyl cyclase enzyme [Plasmodium falciparum]
Length = 3124
Score = 31.6 bits (70), Expect = 2.4
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1
Query: 174 ELLFINTMIFSMKGSFFL*FHV-IFFNFARVFPIH 73
+L+FI M+F K FF+ F++ + ++F+++F IH
Sbjct: 2855 QLIFIKNMLFKHKFFFFVFFYIFLIYSFSKLFSIH 2889
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 327,252,567
Number of Sequences: 1393205
Number of extensions: 6037399
Number of successful extensions: 13801
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13795
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 6956733048
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
