Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002545A_C01 KMC002545A_c01
(497 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201024.1| putative protein; protein id: At5g62180.1 [Arab... 121 4e-27
ref|NP_182085.1| unknown protein; protein id: At2g45610.1 [Arabi... 88 5e-17
gb|AAF77578.1|AF072533_1 pepper esterase [Capsicum annuum] 87 8e-17
ref|NP_566047.1| expressed protein; protein id: At2g45600.1, sup... 74 9e-13
gb|AAM65132.1| unknown [Arabidopsis thaliana] 73 2e-12
>ref|NP_201024.1| putative protein; protein id: At5g62180.1 [Arabidopsis thaliana]
gi|8809631|dbj|BAA97182.1| HSR203J protein-like protein
[Arabidopsis thaliana]
Length = 327
Score = 121 bits (304), Expect = 4e-27
Identities = 57/121 (47%), Positives = 84/121 (69%)
Frame = -1
Query: 497 RTGSELRMVNDSHLSLCSNDMLWELSLPVGVNRDNEYCNPAVGNGPVRLEEIKRLGWRIL 318
R+ SE+R++ND D++W+LSLPVGV+RD+EY NP VG+G +LE+I RL W+++
Sbjct: 206 RSESEIRLMNDQVCPPIVTDVMWDLSLPVGVDRDHEYSNPTVGDGSEKLEKIGRLRWKVM 265
Query: 317 VTGCSGDPLMDRQVGLVRLMQKEGVRVVGHFTEGDYHGVQDSEPLKAKQLFVVIKRFISS 138
+ G DP++D Q + +LM+K+GV VV H+T G HG + +P K K LF+ IK FI S
Sbjct: 266 MIGGEDDPMIDLQKDVAKLMKKKGVEVVEHYTGGHVHGAEIRDPSKRKTLFLSIKNFIFS 325
Query: 137 L 135
+
Sbjct: 326 V 326
>ref|NP_182085.1| unknown protein; protein id: At2g45610.1 [Arabidopsis thaliana]
gi|7485628|pir||T00874 hypothetical protein At2g45610
[imported] - Arabidopsis thaliana
gi|2979556|gb|AAC06165.1| unknown protein [Arabidopsis
thaliana]
Length = 324
Score = 88.2 bits (217), Expect = 5e-17
Identities = 52/119 (43%), Positives = 73/119 (60%)
Frame = -1
Query: 497 RTGSELRMVNDSHLSLCSNDMLWELSLPVGVNRDNEYCNPAVGNGPVRLEEIKRLGWRIL 318
RT SEL+ D + + + D +WELSLPVGV+RD+ YCNP +G P + E++ RLG R L
Sbjct: 209 RTKSELKNFADPVMPVPAVDAMWELSLPVGVDRDHRYCNP-LGYLPQK-EKVGRLG-RCL 265
Query: 317 VTGCSGDPLMDRQVGLVRLMQKEGVRVVGHFTEGDYHGVQDSEPLKAKQLFVVIKRFIS 141
V G GD +DRQ V L+ GVRV F + +H ++ +P +A L +I+ FIS
Sbjct: 266 VIGYGGDTSLDRQQDFVNLLVAAGVRVEARFDDAGFHSIELVDPRRAVALLNMIRDFIS 324
>gb|AAF77578.1|AF072533_1 pepper esterase [Capsicum annuum]
Length = 328
Score = 87.4 bits (215), Expect = 8e-17
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = -1
Query: 497 RTGSELRMVNDSHLSLCSNDMLWELSLPVG-VNRDNEYCNPAVGNGPVRLEEIKRLGWRI 321
RT SE ++ +D L L + D +++LSLP G ++ D+EY NP + G L+++ GW+I
Sbjct: 206 RTESEEKLKDDQLLPLHAIDKMFDLSLPKGTLDHDHEYSNPFLNGGSKHLDDVIAQGWKI 265
Query: 320 LVTGCSGDPLMDRQVGLVRLMQKEGVRVVGHFTEGDYHGVQDSEPLKAKQLFVVIKRFI 144
LVTG SGDPL+D M+++G++ F +G YH ++ EP KA L K FI
Sbjct: 266 LVTGVSGDPLVDNARNFANFMEEKGIKTFKLFGDG-YHAIEGFEPSKAAALIGATKDFI 323
>ref|NP_566047.1| expressed protein; protein id: At2g45600.1, supported by cDNA:
36855., supported by cDNA: gi_16604486 [Arabidopsis
thaliana] gi|7485627|pir||T00873 hypothetical protein
At2g45600 [imported] - Arabidopsis thaliana
gi|2979555|gb|AAC06164.1| expressed protein [Arabidopsis
thaliana] gi|16604487|gb|AAL24249.1| At2g45600/F17K2.13
[Arabidopsis thaliana]
Length = 329
Score = 73.9 bits (180), Expect = 9e-13
Identities = 40/117 (34%), Positives = 64/117 (54%)
Frame = -1
Query: 488 SELRMVNDSHLSLCSNDMLWELSLPVGVNRDNEYCNPAVGNGPVRLEEIKRLGWRILVTG 309
SE R+ +D L + +LW L LP GV+RD+ Y NP +GP +++ R L+ G
Sbjct: 202 SESRLKDDKICPLPATHLLWSLCLPDGVDRDHVYSNPIKSSGPQEKDKMGRFP-STLING 260
Query: 308 CSGDPLMDRQVGLVRLMQKEGVRVVGHFTEGDYHGVQDSEPLKAKQLFVVIKRFISS 138
GDPL+DRQ + +++ GV V F + +H + + KAK L+ ++ F+ S
Sbjct: 261 YGGDPLVDRQRHVAEMLKGRGVHVETRFDKDGFHACELFDGNKAKALYETVEAFMKS 317
>gb|AAM65132.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 72.8 bits (177), Expect = 2e-12
Identities = 40/117 (34%), Positives = 63/117 (53%)
Frame = -1
Query: 488 SELRMVNDSHLSLCSNDMLWELSLPVGVNRDNEYCNPAVGNGPVRLEEIKRLGWRILVTG 309
SE R+ D L + +LW L LP GV+RD+ Y NP +GP +++ R L+ G
Sbjct: 202 SESRLKYDKICPLPATHLLWSLCLPDGVDRDHVYSNPIKSSGPQEKDKMGRFP-STLING 260
Query: 308 CSGDPLMDRQVGLVRLMQKEGVRVVGHFTEGDYHGVQDSEPLKAKQLFVVIKRFISS 138
GDPL+DRQ + +++ GV V F + +H + + KAK L+ ++ F+ S
Sbjct: 261 YGGDPLVDRQRHVAEMLKGRGVHVETRFDKDGFHACELFDGNKAKALYETVEAFMKS 317
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,432,328
Number of Sequences: 1393205
Number of extensions: 9672661
Number of successful extensions: 27654
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 26271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27589
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
