Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002536A_C01 KMC002536A_c01
(952 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08521.1| sucrose cleavage protein-like [Arabidopsis thali... 138 1e-31
ref|NP_198867.1| sucrose cleavage protein -like; protein id: At5... 138 1e-31
gb|AAM62596.1| sucrose cleavage protein-like [Arabidopsis thaliana] 137 2e-31
pir||S51376 sucrose cleavage protein - potato gi|707001|gb|AAB33... 137 2e-31
dbj|BAB01287.1| sucrose cleavage protein-like [Arabidopsis thali... 130 4e-29
>dbj|BAB08521.1| sucrose cleavage protein-like [Arabidopsis thaliana]
Length = 309
Score = 138 bits (347), Expect = 1e-31
Identities = 72/154 (46%), Positives = 94/154 (60%), Gaps = 1/154 (0%)
Frame = -3
Query: 950 NVIIYSLDXDEKMMGHWYGYVTPNDVPELLDQHIAKGEVIKRLWRGQMGPSVAEVNGVDD 771
N+II+ D K+ G+WYGYVTP+DVPELLDQHIAKGE+I+R+WRGQMG E V +
Sbjct: 165 NLIIFCPDSAGKITGNWYGYVTPDDVPELLDQHIAKGEIIQRIWRGQMGLPGGEAEKVHE 224
Query: 770 QK-LANGEDTNKGKENGIKSDDLISKDVGGCCQGVNGVSCCRIEQSNGIEGSTEKSKISS 594
QK + NG K + G GGCCQG NGVSCC+ E E K +
Sbjct: 225 QKVIPNGHGVVKEESKGF---------TGGCCQGSNGVSCCQDETPKPEPIKKEVKKCTI 275
Query: 593 NWSGLKERDILIGVGVLGAVAAVAVAFKIYKRSG 492
+ L + ++ IG V+GA+A +A+AF +KRSG
Sbjct: 276 WFQPLDKEELYIGAAVVGAIATIAMAFTFFKRSG 309
>ref|NP_198867.1| sucrose cleavage protein -like; protein id: At5g40510.1, supported
by cDNA: 148108., supported by cDNA: gi_17979495,
supported by cDNA: gi_20147290 [Arabidopsis thaliana]
gi|17979496|gb|AAL50084.1| AT5g40510/MNF13_30
[Arabidopsis thaliana] gi|20147291|gb|AAM10359.1|
AT5g40510/MNF13_30 [Arabidopsis thaliana]
Length = 333
Score = 138 bits (347), Expect = 1e-31
Identities = 72/154 (46%), Positives = 94/154 (60%), Gaps = 1/154 (0%)
Frame = -3
Query: 950 NVIIYSLDXDEKMMGHWYGYVTPNDVPELLDQHIAKGEVIKRLWRGQMGPSVAEVNGVDD 771
N+II+ D K+ G+WYGYVTP+DVPELLDQHIAKGE+I+R+WRGQMG E V +
Sbjct: 189 NLIIFCPDSAGKITGNWYGYVTPDDVPELLDQHIAKGEIIQRIWRGQMGLPGGEAEKVHE 248
Query: 770 QK-LANGEDTNKGKENGIKSDDLISKDVGGCCQGVNGVSCCRIEQSNGIEGSTEKSKISS 594
QK + NG K + G GGCCQG NGVSCC+ E E K +
Sbjct: 249 QKVIPNGHGVVKEESKGF---------TGGCCQGSNGVSCCQDETPKPEPIKKEVKKCTI 299
Query: 593 NWSGLKERDILIGVGVLGAVAAVAVAFKIYKRSG 492
+ L + ++ IG V+GA+A +A+AF +KRSG
Sbjct: 300 WFQPLDKEELYIGAAVVGAIATIAMAFTFFKRSG 333
>gb|AAM62596.1| sucrose cleavage protein-like [Arabidopsis thaliana]
Length = 333
Score = 137 bits (346), Expect = 2e-31
Identities = 72/154 (46%), Positives = 94/154 (60%), Gaps = 1/154 (0%)
Frame = -3
Query: 950 NVIIYSLDXDEKMMGHWYGYVTPNDVPELLDQHIAKGEVIKRLWRGQMGPSVAEVNGVDD 771
N+II+ D K+ G+WYGYVTP+DVPELLDQHIAKGE+I+R+WRGQMG E V +
Sbjct: 189 NLIIFCPDSAGKITGNWYGYVTPDDVPELLDQHIAKGEIIQRIWRGQMGLPGGEAEKVHE 248
Query: 770 QK-LANGEDTNKGKENGIKSDDLISKDVGGCCQGVNGVSCCRIEQSNGIEGSTEKSKISS 594
QK + NG K + G GGCCQG NGVSCC+ E E K +
Sbjct: 249 QKVIPNGNGVVKEESKGF---------TGGCCQGSNGVSCCQDETPKPEPIKKEVRKCTI 299
Query: 593 NWSGLKERDILIGVGVLGAVAAVAVAFKIYKRSG 492
+ L + ++ IG V+GA+A +A+AF +KRSG
Sbjct: 300 WFQPLDKEELYIGAAVVGAIATIAMAFTFFKRSG 333
>pir||S51376 sucrose cleavage protein - potato gi|707001|gb|AAB33256.1|
Clostridium pasteurianum ferredoxin homolog [Solanum
tuberosum]
Length = 322
Score = 137 bits (345), Expect = 2e-31
Identities = 78/156 (50%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Frame = -3
Query: 950 NVIIYSLDXDEKMMGHWYGYVTPNDVPELLDQHIAKGEVIKRLWRGQMGPSVAEVNGVDD 771
NVII+S D ++GHWYGYVTP+DVP LLD+HI +G+VI+RLWRGQMG + VD+
Sbjct: 172 NVIIFSSGKDGDIVGHWYGYVTPSDVPALLDEHIGEGKVIERLWRGQMGQYEKVTDKVDE 231
Query: 770 QKLANGEDTNKGK---ENGIKSDDLISKDVGGCCQGVNGVSCCRIEQSNGIEGSTEKSKI 600
QK+ E TN+ K ENG + + S CCQG GVSCCR + E + +
Sbjct: 232 QKVP--EVTNEEKKPLENGSQESSVTS---FSCCQGAAGVSCCRDASAEQEENKKGQGTV 286
Query: 599 SSNWSG-LKERDILIGVGVLGAVAAVAVAFKIYKRS 495
SNW G ++R+IL VGV+GAVA VAVA+ YK+S
Sbjct: 287 -SNWFGKWEQREILARVGVVGAVAVVAVAYGFYKKS 321
>dbj|BAB01287.1| sucrose cleavage protein-like [Arabidopsis thaliana]
Length = 314
Score = 130 bits (326), Expect = 4e-29
Identities = 68/156 (43%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Frame = -3
Query: 950 NVIIYSLDXDEKMMGHWYGYVTPNDVPELLDQHIAKGEVIKRLWRGQM--GPSVAEVNGV 777
N+I++S D + GHWYGYVTP+DVP +LDQHIAKGE+I+ L RGQM P E
Sbjct: 166 NLIVFSPDSAGNVSGHWYGYVTPDDVPAMLDQHIAKGEIIQNLSRGQMRLRPEGEEAEKE 225
Query: 776 DDQKLANGEDTNKGKENGIKSDDLISKDVGGCCQGVNGVSCCRIEQSNGIEGSTEKSKIS 597
D+ K+ NG + ++ GGCCQG NGVSCC Q E ++ +
Sbjct: 226 DEHKIPNGNSVMVEEREPVEQKGF----TGGCCQGANGVSCC---QEQAAEPVKKEGCMK 278
Query: 596 SNW-SGLKERDILIGVGVLGAVAAVAVAFKIYKRSG 492
NW + + ++L+G V+ AVA VAVA+ IY+RSG
Sbjct: 279 LNWLKSMGKEEVLLGAAVVSAVATVAVAYSIYRRSG 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 796,791,915
Number of Sequences: 1393205
Number of extensions: 17488840
Number of successful extensions: 47429
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47333
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 53523731176
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
