Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002527A_C01 KMC002527A_c01
(467 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK71233.1| S-adenosylmethionine synthetase [Brassica juncea] 216 6e-60
gb|AAK71235.1| S-adenosylmethionine synthetase [Brassica juncea] 216 6e-60
sp|P49611|METK_BRAJU S-adenosylmethionine synthetase (Methionine... 216 6e-60
ref|NP_192094.1| S-adenosylmethionine synthase 2; protein id: At... 216 8e-60
gb|AAN07179.1| S-adenosylmethionine synthase [Carica papaya] 213 5e-59
>gb|AAK71233.1| S-adenosylmethionine synthetase [Brassica juncea]
Length = 393
Score = 216 bits (551), Expect(2) = 6e-60
Identities = 103/106 (97%), Positives = 105/106 (98%)
Frame = +1
Query: 148 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTI 327
DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+I
Sbjct: 17 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSI 76
Query: 328 GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 465
GF+SDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD
Sbjct: 77 GFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 122
Score = 35.4 bits (80), Expect(2) = 6e-60
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 102 ETFLFTSESVNEGHP 146
ETFLFTSESVNEGHP
Sbjct: 2 ETFLFTSESVNEGHP 16
>gb|AAK71235.1| S-adenosylmethionine synthetase [Brassica juncea]
Length = 393
Score = 216 bits (551), Expect(2) = 6e-60
Identities = 103/106 (97%), Positives = 105/106 (98%)
Frame = +1
Query: 148 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTI 327
DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+I
Sbjct: 17 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSI 76
Query: 328 GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 465
GF+SDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD
Sbjct: 77 GFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 122
Score = 35.4 bits (80), Expect(2) = 6e-60
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 102 ETFLFTSESVNEGHP 146
ETFLFTSESVNEGHP
Sbjct: 2 ETFLFTSESVNEGHP 16
>sp|P49611|METK_BRAJU S-adenosylmethionine synthetase (Methionine adenosyltransferase)
(AdoMet synthetase) gi|790978|emb|CAA56590.1|
S-adenosyl-L-methionine synthetase [Brassica juncea]
Length = 393
Score = 216 bits (551), Expect(2) = 6e-60
Identities = 103/106 (97%), Positives = 105/106 (98%)
Frame = +1
Query: 148 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTI 327
DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+I
Sbjct: 17 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSI 76
Query: 328 GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 465
GF+SDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD
Sbjct: 77 GFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 122
Score = 35.4 bits (80), Expect(2) = 6e-60
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 102 ETFLFTSESVNEGHP 146
ETFLFTSESVNEGHP
Sbjct: 2 ETFLFTSESVNEGHP 16
>ref|NP_192094.1| S-adenosylmethionine synthase 2; protein id: At4g01850.1, supported
by cDNA: 36518., supported by cDNA: gi_18252202,
supported by cDNA: gi_20453167 [Arabidopsis thaliana]
gi|127045|sp|P17562|METL_ARATH S-adenosylmethionine
synthetase 2 (Methionine adenosyltransferase 2) (AdoMet
synthetase 2) gi|99756|pir||JQ0410 methionine
adenosyltransferase (EC 2.5.1.6) 2 - Arabidopsis
thaliana gi|166874|gb|AAA32869.1| S-adenosylmethionine
synthetase (sam-2) gi|4558554|gb|AAD22647.1|AC007138_11
S-adenosylmethionine synthase 2 [Arabidopsis thaliana]
gi|7268569|emb|CAB80678.1| S-adenosylmethionine synthase
2 [Arabidopsis thaliana] gi|18252203|gb|AAL61934.1|
S-adenosylmethionine synthase 2 [Arabidopsis thaliana]
gi|20453168|gb|AAM19825.1| AT4g01850/T7B11_11
[Arabidopsis thaliana] gi|23308349|gb|AAN18144.1|
At4g01850/T7B11_11 [Arabidopsis thaliana]
Length = 393
Score = 216 bits (550), Expect(2) = 8e-60
Identities = 102/106 (96%), Positives = 105/106 (98%)
Frame = +1
Query: 148 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTI 327
DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA +DYEKIVRDTCR+I
Sbjct: 17 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATIDYEKIVRDTCRSI 76
Query: 328 GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 465
GF+SDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD
Sbjct: 77 GFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 122
Score = 35.4 bits (80), Expect(2) = 8e-60
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 102 ETFLFTSESVNEGHP 146
ETFLFTSESVNEGHP
Sbjct: 2 ETFLFTSESVNEGHP 16
>gb|AAN07179.1| S-adenosylmethionine synthase [Carica papaya]
Length = 429
Score = 213 bits (543), Expect(2) = 5e-59
Identities = 102/106 (96%), Positives = 105/106 (98%)
Frame = +1
Query: 148 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTI 327
DKLCDQISDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCR+I
Sbjct: 17 DKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRSI 76
Query: 328 GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGD 465
GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGD
Sbjct: 77 GFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGD 122
Score = 35.4 bits (80), Expect(2) = 5e-59
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 102 ETFLFTSESVNEGHP 146
ETFLFTSESVNEGHP
Sbjct: 2 ETFLFTSESVNEGHP 16
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 433,572,469
Number of Sequences: 1393205
Number of extensions: 9378175
Number of successful extensions: 28092
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 26914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28012
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
