Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002523A_C02 KMC002523A_c02
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177492.1| MAP kinase, putative; protein id: At1g73500.1, ... 153 2e-36
ref|NP_173271.1| MAP kinase kinase 5, putative; protein id: At1g... 144 5e-34
gb|AAN52742.1| Unknown protein [Oryza sativa (japonica cultivar-... 138 4e-32
gb|AAK73104.1|AF391808_2 MAP kinase kinase [Zea mays] 122 2e-27
ref|NP_175577.1| MAP kinase kinase 4 (ATMKK4); protein id: At1g5... 121 6e-27
>ref|NP_177492.1| MAP kinase, putative; protein id: At1g73500.1, supported by cDNA:
112118. [Arabidopsis thaliana] gi|25287619|pir||G96761
probable MAP kinase T9L24.32 [imported] - Arabidopsis
thaliana gi|11120804|gb|AAG30984.1|AC012396_20 MAP
kinase, putative [Arabidopsis thaliana]
gi|21536805|gb|AAM61137.1| MAP kinase, putative
[Arabidopsis thaliana] gi|26452087|dbj|BAC43133.1|
unknown protein [Arabidopsis thaliana]
gi|28950881|gb|AAO63364.1| At1g73500 [Arabidopsis
thaliana]
Length = 310
Score = 153 bits (386), Expect = 2e-36
Identities = 67/100 (67%), Positives = 79/100 (79%)
Frame = -2
Query: 548 SPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWVTLMCGICFGDPP 369
SPERFD E+SGG+ + +A DIWS GL + EL VGHFP L GQRPDW TLMC +CFG+PP
Sbjct: 210 SPERFDSESSGGSSDIYAGDIWSFGLMMLELLVGHFPLLPPGQRPDWATLMCAVCFGEPP 269
Query: 368 SLPETASPEFRSFVECCLKKESGERWTAAQLLAHPFVCKD 249
PE S EFRSFVECCL+K+S +RWTA QLLAHPF+ +D
Sbjct: 270 RAPEGCSEEFRSFVECCLRKDSSKRWTAPQLLAHPFLRED 309
>ref|NP_173271.1| MAP kinase kinase 5, putative; protein id: At1g18350.1 [Arabidopsis
thaliana] gi|6714299|gb|AAF25995.1|AC013354_14 F15H18.14
[Arabidopsis thaliana]
Length = 307
Score = 144 bits (364), Expect = 5e-34
Identities = 64/97 (65%), Positives = 76/97 (77%)
Frame = -2
Query: 548 SPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWVTLMCGICFGDPP 369
SPERFD A+G N + +A DIWS G+ + EL+VGHFP L GQRPDW TLMC +CFG+PP
Sbjct: 208 SPERFD-SAAGENSDVYAGDIWSFGVMILELFVGHFPLLPQGQRPDWATLMCVVCFGEPP 266
Query: 368 SLPETASPEFRSFVECCLKKESGERWTAAQLLAHPFV 258
PE S EFRSFV+CCL+KES ERWTA+QLL HPF+
Sbjct: 267 RAPEGCSDEFRSFVDCCLRKESSERWTASQLLGHPFL 303
>gb|AAN52742.1| Unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 339
Score = 138 bits (348), Expect = 4e-32
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = -2
Query: 548 SPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWVTLMCGICFGDPP 369
SPERFDPEA G+Y+ +AAD+WSLG+ + ELY+GHFP L GQRPDW LMC ICFG+ P
Sbjct: 218 SPERFDPEAYSGDYDPYAADVWSLGVAILELYLGHFPLLPVGQRPDWAALMCAICFGEAP 277
Query: 368 SLPETASPEFRSFVECCLKKESGERWTAAQLLAHPFVCK 252
+P AS EFR FV CL+K++G R + +LL HPF+ +
Sbjct: 278 EMPAAASEEFRDFVSRCLEKKAGRRASVGELLEHPFIAE 316
>gb|AAK73104.1|AF391808_2 MAP kinase kinase [Zea mays]
Length = 406
Score = 122 bits (307), Expect = 2e-27
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = -2
Query: 548 SPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLQ-AGQRPDWVTLMCGICFGDP 372
SPER + + + G+Y+G+A DIWS GL++ E Y+G FPF + G++ DW LMC IC+ DP
Sbjct: 295 SPERINTDLNDGSYDGYAGDIWSFGLSILEFYLGRFPFGENLGRQGDWAALMCAICYNDP 354
Query: 371 PSLPETASPEFRSFVECCLKKESGERWTAAQLLAHPFV 258
P P TAS EFR F+ CCL+K +R TAAQLL HPFV
Sbjct: 355 PEPPPTASREFRGFIACCLQKNPAKRLTAAQLLQHPFV 392
>ref|NP_175577.1| MAP kinase kinase 4 (ATMKK4); protein id: At1g51660.1, supported by
cDNA: gi_11908061, supported by cDNA: gi_13194803,
supported by cDNA: gi_13265419, supported by cDNA:
gi_14030614, supported by cDNA: gi_3219270 [Arabidopsis
thaliana] gi|11358510|pir||T51339 mitogen-activated
protein kinase kinase (EC 2.7.1.-) 4 [validated] -
Arabidopsis thaliana gi|3219271|dbj|BAA28830.1| MAP
kinase kinase 4 [Arabidopsis thaliana]
gi|11692830|gb|AAG40018.1|AF324667_1 At1g51660
[Arabidopsis thaliana]
gi|11908062|gb|AAG41460.1|AF326878_1 putative MAP kinase
kinase 4 [Arabidopsis thaliana]
gi|12321661|gb|AAG50863.1|AC025294_1 MAP kinase kinase 4
(ATMKK4) [Arabidopsis thaliana]
gi|13194804|gb|AAK15564.1|AF349517_1 putative MAP kinase
kinase 4 (ATMKK4) [Arabidopsis thaliana]
gi|14030615|gb|AAK52982.1|AF375398_1 At1g51660/F19C24_26
[Arabidopsis thaliana] gi|22136538|gb|AAM91055.1|
At1g51660/F19C24_26 [Arabidopsis thaliana]
Length = 366
Score = 121 bits (303), Expect = 6e-27
Identities = 51/99 (51%), Positives = 70/99 (70%)
Frame = -2
Query: 548 SPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWVTLMCGICFGDPP 369
SPER + + + G Y+G+A DIWSLG+++ E Y+G FPF ++ DW +LMC IC PP
Sbjct: 239 SPERINTDLNQGKYDGYAGDIWSLGVSILEFYLGRFPF-PVSRQGDWASLMCAICMSQPP 297
Query: 368 SLPETASPEFRSFVECCLKKESGERWTAAQLLAHPFVCK 252
P TASPEFR F+ CCL++E G+R +A QLL HPF+ +
Sbjct: 298 EAPATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILR 336
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 498,418,966
Number of Sequences: 1393205
Number of extensions: 11577774
Number of successful extensions: 38140
Number of sequences better than 10.0: 2937
Number of HSP's better than 10.0 without gapping: 35201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36992
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
