Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002516A_C01 KMC002516A_c01
(685 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB89601.1| P0446G04.25 [Oryza sativa (japonica cultivar-gro... 140 2e-32
ref|NP_200672.1| putative protein; protein id: At5g58640.1, supp... 125 7e-28
ref|NP_190314.1| putative protein; protein id: At3g47300.1 [Arab... 94 2e-18
dbj|BAA97333.1| contains similarity to unknown protein~gene_id:M... 90 3e-17
sp|Q9BN19|HSP6_HETGL Putative esophageal gland cell secretory pr... 65 1e-09
>dbj|BAB89601.1| P0446G04.25 [Oryza sativa (japonica cultivar-group)]
gi|20805244|dbj|BAB92910.1| P0460C04.2 [Oryza sativa
(japonica cultivar-group)]
Length = 232
Score = 140 bits (352), Expect = 2e-32
Identities = 62/97 (63%), Positives = 80/97 (81%)
Frame = -2
Query: 681 GIVVSIVAGDQIFPRLGFVPPPWYYSLRAHKFRSIASTWLFANFIQSFLQSSGAFEVYCN 502
G + +++AGDQIFPR G VPPPWYYSLRA++F ++A+ WLF NF QSFLQSSGAFEVYCN
Sbjct: 132 GAMATLMAGDQIFPRFGMVPPPWYYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCN 191
Query: 501 GELVFSKLKENRFPGEIELKDLVERRLANTRFFNSVE 391
G+LVFSKL E RFP E EL++L+ RL +++F ++E
Sbjct: 192 GQLVFSKLSEQRFPSEFELRELIGNRLPDSQFGKNLE 228
>ref|NP_200672.1| putative protein; protein id: At5g58640.1, supported by cDNA:
36809., supported by cDNA: gi_17933296, supported by
cDNA: gi_20453392 [Arabidopsis thaliana]
gi|17933297|gb|AAL48231.1|AF446358_1 AT5g58640/mzn1_90
[Arabidopsis thaliana] gi|20453393|gb|AAM19935.1|
AT5g58640/mzn1_90 [Arabidopsis thaliana]
gi|21593175|gb|AAM65124.1| unknown [Arabidopsis
thaliana]
Length = 228
Score = 125 bits (313), Expect = 7e-28
Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = -2
Query: 681 GIVVSIVAGDQIFPRLGFV-PPPWYYSLRAHKFRSIASTWLFANFIQSFLQSSGAFEVYC 505
G++ IVAGD+I P +G PP W++SLRA++F S+ASTWL NF+QS+LQSSGAFEV+C
Sbjct: 130 GVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQSSGAFEVHC 189
Query: 504 NGELVFSKLKENRFPGEIELKDLVERRL 421
NGE VFSKLKE RFPGEIEL+DL+ + L
Sbjct: 190 NGEPVFSKLKEGRFPGEIELRDLISKTL 217
>ref|NP_190314.1| putative protein; protein id: At3g47300.1 [Arabidopsis thaliana]
gi|17369615|sp|Q9STZ2|SELT_ARATH Putative selT-like
protein precursor gi|7460124|pir||T12985 hypothetical
protein T21L8.50 - Arabidopsis thaliana
gi|5541697|emb|CAB51202.1| putative protein [Arabidopsis
thaliana]
Length = 208
Score = 94.0 bits (232), Expect = 2e-18
Identities = 44/67 (65%), Positives = 54/67 (79%), Gaps = 1/67 (1%)
Frame = -2
Query: 681 GIVVSIVAGDQIFPRLGFVPPP-WYYSLRAHKFRSIASTWLFANFIQSFLQSSGAFEVYC 505
G++ I+ G+QIFP +G PP WY+SLRA++F S+ASTWL NF+QSFLQSSGAFEV C
Sbjct: 113 GVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGAFEVSC 172
Query: 504 NGELVFS 484
NGELV S
Sbjct: 173 NGELVSS 179
>dbj|BAA97333.1| contains similarity to unknown protein~gene_id:MZN1.9~pir||T12985
[Arabidopsis thaliana]
Length = 104
Score = 90.1 bits (222), Expect = 3e-17
Identities = 41/65 (63%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = -2
Query: 681 GIVVSIVAGDQIFPRLGFV-PPPWYYSLRAHKFRSIASTWLFANFIQSFLQSSGAFEVYC 505
G++ IVAGD+I P +G PP W++SLRA++F S+ASTWL NF+QS+LQSSGAFEV+C
Sbjct: 38 GVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQSSGAFEVHC 97
Query: 504 NGELV 490
NGE V
Sbjct: 98 NGEPV 102
>sp|Q9BN19|HSP6_HETGL Putative esophageal gland cell secretory protein 6 precursor
gi|12669897|gb|AAG21336.2|AF273733_1 hypothetical
esophageal gland cell secretory protein 6 [Heterodera
glycines]
Length = 244
Score = 64.7 bits (156), Expect = 1e-09
Identities = 34/101 (33%), Positives = 57/101 (55%)
Frame = -2
Query: 678 IVVSIVAGDQIFPRLGFVPPPWYYSLRAHKFRSIASTWLFANFIQSFLQSSGAFEVYCNG 499
++V +V+G FP LG P ++ + +++ + +LF+N I+ LQS+GAFE+Y
Sbjct: 138 LIVCVVSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIES 197
Query: 498 ELVFSKLKENRFPGEIELKDLVERRLANTRFFNSVEGASSA 376
E ++SKL+ R P EL ++ LA R G+SS+
Sbjct: 198 ERIWSKLESGRVPSPPELFQAIDSHLAIRRGGAGRFGSSSS 238
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 539,294,404
Number of Sequences: 1393205
Number of extensions: 10731924
Number of successful extensions: 25971
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25967
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30552968016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
