Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002490A_C01 KMC002490A_c01
(629 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194245.1| acid phosphatase - like protein; protein id: At... 245 3e-64
prf||1908418A acid phosphatase 1 245 3e-64
sp|P27061|PPA1_LYCES Acid phosphatase precursor 1 gi|7435103|pir... 244 7e-64
ref|NP_199939.1| acid phosphatase; protein id: At5g51260.1 [Arab... 240 1e-62
ref|NP_194656.1| acid phosphatase-like protein; protein id: At4g... 195 4e-49
>ref|NP_194245.1| acid phosphatase - like protein; protein id: At4g25150.1, supported
by cDNA: gi_20259050 [Arabidopsis thaliana]
gi|7435102|pir||T05536 acid phosphatase (EC 3.1.3.2) -
Arabidopsis thaliana gi|4455258|emb|CAB36757.1| acid
phosphatase-like protein [Arabidopsis thaliana]
gi|7269365|emb|CAB79424.1| acid phosphatase-like protein
[Arabidopsis thaliana] gi|18389260|gb|AAL67073.1|
putative acid phosphatase [Arabidopsis thaliana]
gi|20259051|gb|AAM14241.1| putative acid phosphatase
[Arabidopsis thaliana]
Length = 260
Score = 245 bits (626), Expect = 3e-64
Identities = 117/154 (75%), Positives = 129/154 (82%)
Frame = -2
Query: 628 DGKDAWIFDIDETLLSNLPYYAAHGYGLEVFDHGKFDGWVEKGVAPAIEPSLKLYEDVLN 449
DGKD WIFDIDETLLSNLPYY HG GLEVFDH KFD WVEKG+APAI PSLKLY+ V++
Sbjct: 106 DGKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIH 165
Query: 448 RGFKVILLTGRAERHRSITVDNLINAGIRDWHQLILRSSDDHGKLAVIYKSEKRSEMEKD 269
G+KVILLTGR E HR ITV+NL NAG +W +LILRS DD K A +YKSEKR EM K+
Sbjct: 166 LGYKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATMYKSEKREEMVKE 225
Query: 268 GYRIHGNSGDQWSDLLGSSVSVRSFKLPNPMYYI 167
GYRI GNSGDQWSDLLGS++S RSFKLPNPMYYI
Sbjct: 226 GYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYI 259
>prf||1908418A acid phosphatase 1
Length = 255
Score = 245 bits (626), Expect = 3e-64
Identities = 113/154 (73%), Positives = 132/154 (85%)
Frame = -2
Query: 628 DGKDAWIFDIDETLLSNLPYYAAHGYGLEVFDHGKFDGWVEKGVAPAIEPSLKLYEDVLN 449
DG+D WIFD+DETLLSNLPYY+ H YGLEVFD +FD WVE G+APA+ SLKLY++VL
Sbjct: 101 DGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGIAPALGSSLKLYQEVLK 160
Query: 448 RGFKVILLTGRAERHRSITVDNLINAGIRDWHQLILRSSDDHGKLAVIYKSEKRSEMEKD 269
GFKV LLTGR+ERHRS+TV+NL+NAG DWH+LILR SDDHGK A YKSE+R+ M ++
Sbjct: 161 LGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEE 220
Query: 268 GYRIHGNSGDQWSDLLGSSVSVRSFKLPNPMYYI 167
G+RI GNSGDQWSDLLGSS+S RSFKLPNPMYYI
Sbjct: 221 GFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYYI 254
>sp|P27061|PPA1_LYCES Acid phosphatase precursor 1 gi|7435103|pir||T06587 acid
phosphatase (EC 3.1.3.2) 1 - tomato
gi|170370|gb|AAA34134.1| acid phosphatase type 1
gi|170372|gb|AAA34135.1| acid phosphatase type 5
gi|28375516|emb|CAA39370.1| acid phosphatase
[Lycopersicon esculentum] gi|445121|prf||1908427A acid
phosphatase 1
Length = 255
Score = 244 bits (623), Expect = 7e-64
Identities = 113/154 (73%), Positives = 131/154 (84%)
Frame = -2
Query: 628 DGKDAWIFDIDETLLSNLPYYAAHGYGLEVFDHGKFDGWVEKGVAPAIEPSLKLYEDVLN 449
DG+D WIFD+DETLLSNLPYY+ H YGLEVFD +FD WVE G APA+ SLKLY++VL
Sbjct: 101 DGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLK 160
Query: 448 RGFKVILLTGRAERHRSITVDNLINAGIRDWHQLILRSSDDHGKLAVIYKSEKRSEMEKD 269
GFKV LLTGR+ERHRS+TV+NL+NAG DWH+LILR SDDHGK A YKSE+R+ M ++
Sbjct: 161 LGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEE 220
Query: 268 GYRIHGNSGDQWSDLLGSSVSVRSFKLPNPMYYI 167
G+RI GNSGDQWSDLLGSS+S RSFKLPNPMYYI
Sbjct: 221 GFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYYI 254
>ref|NP_199939.1| acid phosphatase; protein id: At5g51260.1 [Arabidopsis thaliana]
gi|8843863|dbj|BAA97389.1| acid phosphatase [Arabidopsis
thaliana]
Length = 257
Score = 240 bits (612), Expect = 1e-62
Identities = 112/154 (72%), Positives = 131/154 (84%)
Frame = -2
Query: 628 DGKDAWIFDIDETLLSNLPYYAAHGYGLEVFDHGKFDGWVEKGVAPAIEPSLKLYEDVLN 449
DGKD WIFDIDETLLSNLPYY HG+GLE+FDH +FD WVE+GVAPAI PSLKLY+ VL+
Sbjct: 103 DGKDIWIFDIDETLLSNLPYYIDHGFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVLD 162
Query: 448 RGFKVILLTGRAERHRSITVDNLINAGIRDWHQLILRSSDDHGKLAVIYKSEKRSEMEKD 269
G+KV LLTGR E HR +TV+NLINAG ++W +LILRS ++ K+A +YKSEKR EM K+
Sbjct: 163 LGYKVFLLTGRKESHRLVTVENLINAGFQNWDKLILRSPEEQHKMATLYKSEKRDEMVKE 222
Query: 268 GYRIHGNSGDQWSDLLGSSVSVRSFKLPNPMYYI 167
GYRI GNSGDQWSDLLG+S+S RSFKL NPMYYI
Sbjct: 223 GYRIRGNSGDQWSDLLGTSMSQRSFKLANPMYYI 256
>ref|NP_194656.1| acid phosphatase-like protein; protein id: At4g29270.1, supported
by cDNA: 108301. [Arabidopsis thaliana]
gi|7435100|pir||T13440 acid phosphatase homolog
T17A13.90 - Arabidopsis thaliana
gi|7269825|emb|CAB79685.1| acid phosphatase-like protein
[Arabidopsis thaliana] gi|21536678|gb|AAM61010.1| acid
phosphatase-like protein [Arabidopsis thaliana]
gi|28466939|gb|AAO44078.1| At4g29270 [Arabidopsis
thaliana]
Length = 256
Score = 195 bits (496), Expect = 4e-49
Identities = 92/155 (59%), Positives = 119/155 (76%)
Frame = -2
Query: 628 DGKDAWIFDIDETLLSNLPYYAAHGYGLEVFDHGKFDGWVEKGVAPAIEPSLKLYEDVLN 449
DGKDAW+FDIDETLLSN+ YY A+GYG E +D K++ VEKG P + SL+LY+ +
Sbjct: 102 DGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKK 161
Query: 448 RGFKVILLTGRAERHRSITVDNLINAGIRDWHQLILRSSDDHGKLAVIYKSEKRSEMEKD 269
GF +ILLTGR E HRS+T NL +AG W++L+LR +D GK A YKSE+RS++ K+
Sbjct: 162 LGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQYKSEQRSQVVKE 221
Query: 268 GYRIHGNSGDQWSDLLGSSVSVRSFKLPNPMYYIS 164
GY IHGN+GDQWSDLLG +V+ RSFK+PNPMYY++
Sbjct: 222 GYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA 256
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 577,195,518
Number of Sequences: 1393205
Number of extensions: 13205384
Number of successful extensions: 32335
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 31160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32271
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
