Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002477A_C01 KMC002477A_c01
(728 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB90634.1| protein phosphatase 2C (PP2C) [Fagus sylvatica] 170 2e-41
pir||T51100 protein phosphatase 2C homolog [imported] - common i... 166 4e-40
pir||T05680 hypothetical protein F20M13.80 - Arabidopsis thalian... 163 2e-39
ref|NP_195564.2| putative protein phosphatase-2c; protein id: At... 163 2e-39
gb|AAL32532.1| putative protein phosphatase-2c [Arabidopsis thal... 163 2e-39
>emb|CAB90634.1| protein phosphatase 2C (PP2C) [Fagus sylvatica]
Length = 397
Score = 170 bits (430), Expect = 2e-41
Identities = 83/98 (84%), Positives = 89/98 (90%)
Frame = -1
Query: 728 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 549
WEHLSNQ+AVDIVQNHP GS RRLIK ALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct: 290 WEHLSNQEAVDIVQNHPRSGSVRRLIKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 349
Query: 548 VVVVFLDSNLVSRASSVRGPPVSVRGGGVPLPSRSLAP 435
V+VVFLDSNLVSRASSV+ P +SVRGGG+ LP +LAP
Sbjct: 350 VIVVFLDSNLVSRASSVKCPSISVRGGGINLPHNTLAP 387
>pir||T51100 protein phosphatase 2C homolog [imported] - common ice plant
gi|4206122|gb|AAD11430.1| protein phosphatase 2C homolog
[Mesembryanthemum crystallinum]
Length = 396
Score = 166 bits (419), Expect = 4e-40
Identities = 78/98 (79%), Positives = 91/98 (92%)
Frame = -1
Query: 728 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 549
WEHL+NQ+AVD+VQ P +GSA+RL+K ALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct: 289 WEHLTNQEAVDLVQKSPRNGSAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 348
Query: 548 VVVVFLDSNLVSRASSVRGPPVSVRGGGVPLPSRSLAP 435
VVVVFLDSNL+SR SSVRGP +S+RGGG+ LP+++LAP
Sbjct: 349 VVVVFLDSNLISRGSSVRGPTLSLRGGGIHLPAKTLAP 386
>pir||T05680 hypothetical protein F20M13.80 - Arabidopsis thaliana
gi|4467139|emb|CAB37508.1| putative protein
phosphatase-2c [Arabidopsis thaliana]
gi|7270835|emb|CAB80516.1| putative protein
phosphatase-2c [Arabidopsis thaliana]
Length = 395
Score = 163 bits (413), Expect = 2e-39
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = -1
Query: 728 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 549
WEH+SNQ+AVDIVQNHP +G A+RL+K ALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct: 285 WEHMSNQEAVDIVQNHPRNGIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 344
Query: 548 VVVVFLDSNLVSRASSVRGPPVSVRGGGVPLPSRSLAP 435
V+VVF D+NLVSR S +RGP VSVRG GV LP +LAP
Sbjct: 345 VIVVFFDTNLVSRGSMLRGPAVSVRGAGVNLPHNTLAP 382
>ref|NP_195564.2| putative protein phosphatase-2c; protein id: At4g38520.1, supported
by cDNA: gi_17064755 [Arabidopsis thaliana]
Length = 400
Score = 163 bits (413), Expect = 2e-39
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = -1
Query: 728 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 549
WEH+SNQ+AVDIVQNHP +G A+RL+K ALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct: 290 WEHMSNQEAVDIVQNHPRNGIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 349
Query: 548 VVVVFLDSNLVSRASSVRGPPVSVRGGGVPLPSRSLAP 435
V+VVF D+NLVSR S +RGP VSVRG GV LP +LAP
Sbjct: 350 VIVVFFDTNLVSRGSMLRGPAVSVRGAGVNLPHNTLAP 387
>gb|AAL32532.1| putative protein phosphatase-2c [Arabidopsis thaliana]
Length = 400
Score = 163 bits (413), Expect = 2e-39
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = -1
Query: 728 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 549
WEH+SNQ+AVDIVQNHP +G A+RL+K ALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT
Sbjct: 290 WEHMSNQEAVDIVQNHPRNGIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDIT 349
Query: 548 VVVVFLDSNLVSRASSVRGPPVSVRGGGVPLPSRSLAP 435
V+VVF D+NLVSR S +RGP VSVRG GV LP +LAP
Sbjct: 350 VIVVFFDTNLVSRGSMLRGPAVSVRGAGVNLPHNTLAP 387
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 588,213,437
Number of Sequences: 1393205
Number of extensions: 12295061
Number of successful extensions: 32057
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 31188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32044
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34343566934
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
