Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002473A_C01 KMC002473A_c01
(494 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea br... 88 2e-33
dbj|BAA97003.1| acetyl-CoA C-acetyltransferase [Arabidopsis thal... 91 2e-32
gb|AAM00280.1|AF364059_1 acetoacetyl-CoA thiolase [Arabidopsis t... 91 2e-32
ref|NP_568694.1| acetyl-CoA C-acetyltransferase; protein id: At5... 91 2e-32
ref|NP_199583.1| acetoacyl-CoA-thiolase; protein id: At5g47720.1... 86 1e-31
>gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea brasiliensis]
Length = 411
Score = 88.2 bits (217), Expect(2) = 2e-33
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -1
Query: 350 AVSLGHPLGCSGARILVTLLGVLKRNHGKYGVGASCNGGGGASALVLELV 201
AVSLGHPLGCSGARILVTLLGVL+ +GKYGV + CNGGGGASALVLEL+
Sbjct: 352 AVSLGHPLGCSGARILVTLLGVLRHKNGKYGVASICNGGGGASALVLELM 401
Score = 75.9 bits (185), Expect(2) = 2e-33
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -3
Query: 492 IPQALSHAGLDASEIDFFEINEAFSVVTLCNQQLLGINSEKLNLHGASCILG 337
IP+A+S+AGL+AS+ID++EINEAFSVV L NQ++LG+N EKLN+HG + LG
Sbjct: 305 IPKAISNAGLEASQIDYYEINEAFSVVALANQKILGLNPEKLNVHGGAVSLG 356
>dbj|BAA97003.1| acetyl-CoA C-acetyltransferase [Arabidopsis thaliana]
Length = 486
Score = 91.3 bits (225), Expect(2) = 2e-32
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -1
Query: 350 AVSLGHPLGCSGARILVTLLGVLKRNHGKYGVGASCNGGGGASALVLELV 201
AVSLGHPLGCSGARIL+TLLG+LK+ +GKYGVG CNGGGGASALVLEL+
Sbjct: 437 AVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 486
Score = 69.3 bits (168), Expect(2) = 2e-32
Identities = 30/52 (57%), Positives = 45/52 (85%)
Frame = -3
Query: 492 IPQALSHAGLDASEIDFFEINEAFSVVTLCNQQLLGINSEKLNLHGASCILG 337
IP+A++HAGL++S++D++EINEAF+VV L NQ+LLGI EK+N++G + LG
Sbjct: 390 IPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLG 441
>gb|AAM00280.1|AF364059_1 acetoacetyl-CoA thiolase [Arabidopsis thaliana]
Length = 403
Score = 91.3 bits (225), Expect(2) = 2e-32
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -1
Query: 350 AVSLGHPLGCSGARILVTLLGVLKRNHGKYGVGASCNGGGGASALVLELV 201
AVSLGHPLGCSGARIL+TLLG+LK+ +GKYGVG CNGGGGASALVLEL+
Sbjct: 354 AVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403
Score = 69.3 bits (168), Expect(2) = 2e-32
Identities = 30/52 (57%), Positives = 45/52 (85%)
Frame = -3
Query: 492 IPQALSHAGLDASEIDFFEINEAFSVVTLCNQQLLGINSEKLNLHGASCILG 337
IP+A++HAGL++S++D++EINEAF+VV L NQ+LLGI EK+N++G + LG
Sbjct: 307 IPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLG 358
>ref|NP_568694.1| acetyl-CoA C-acetyltransferase; protein id: At5g48230.1, supported
by cDNA: gi_16604582, supported by cDNA: gi_20258988
[Arabidopsis thaliana] gi|16604583|gb|AAL24148.1|
putative acetyl-CoA C-acetyltransferase [Arabidopsis
thaliana] gi|20258989|gb|AAM14210.1| putative acetyl-CoA
C-acetyltransferase [Arabidopsis thaliana]
Length = 398
Score = 91.3 bits (225), Expect(2) = 2e-32
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -1
Query: 350 AVSLGHPLGCSGARILVTLLGVLKRNHGKYGVGASCNGGGGASALVLELV 201
AVSLGHPLGCSGARIL+TLLG+LK+ +GKYGVG CNGGGGASALVLEL+
Sbjct: 349 AVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 398
Score = 69.3 bits (168), Expect(2) = 2e-32
Identities = 30/52 (57%), Positives = 45/52 (85%)
Frame = -3
Query: 492 IPQALSHAGLDASEIDFFEINEAFSVVTLCNQQLLGINSEKLNLHGASCILG 337
IP+A++HAGL++S++D++EINEAF+VV L NQ+LLGI EK+N++G + LG
Sbjct: 302 IPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLG 353
>ref|NP_199583.1| acetoacyl-CoA-thiolase; protein id: At5g47720.1, supported by cDNA:
93821. [Arabidopsis thaliana]
gi|10177908|dbj|BAB11319.1| acetoacyl-CoA-thiolase
[Arabidopsis thaliana] gi|21618008|gb|AAM67058.1|
acetoacyl-CoA-thiolase [Arabidopsis thaliana]
Length = 415
Score = 85.5 bits (210), Expect(2) = 1e-31
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = -1
Query: 350 AVSLGHPLGCSGARILVTLLGVLKRNHGKYGVGASCNGGGGASALVLELV 201
AVSLGHPLGCSGARILVTLLGVL+ GKYGV + CNGGGGASALVLE +
Sbjct: 356 AVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
Score = 72.0 bits (175), Expect(2) = 1e-31
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = -3
Query: 492 IPQALSHAGLDASEIDFFEINEAFSVVTLCNQQLLGINSEKLNLHGASCILG 337
IP+A+ AGLDAS++D++EINEAFSVV L NQ+LLG++ E+LN HG + LG
Sbjct: 309 IPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,899,788
Number of Sequences: 1393205
Number of extensions: 9648872
Number of successful extensions: 39452
Number of sequences better than 10.0: 560
Number of HSP's better than 10.0 without gapping: 35061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39088
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
