Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002461A_C01 KMC002461A_c01
(665 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O82059|G6PI_SPIOL Glucose-6-phosphate isomerase, cytosolic (G... 169 2e-41
pir||T09154 glucose-6-phosphate isomerase (EC 5.3.1.9), cytosol ... 169 2e-41
sp|P54240|G6P1_CLAXA Glucose-6-phosphate isomerase, cytosolic 1 ... 169 4e-41
sp|P54236|G6P1_CLAFR Glucose-6-phosphate isomerase, cytosolic 1 ... 168 7e-41
sp|P54239|G6P1_CLAWI Glucose-6-phosphate isomerase, cytosolic 1 ... 168 7e-41
>sp|O82059|G6PI_SPIOL Glucose-6-phosphate isomerase, cytosolic (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI)
Length = 565
Score = 169 bits (429), Expect = 2e-41
Identities = 79/98 (80%), Positives = 91/98 (92%)
Frame = -1
Query: 665 RPSISLLLPSLNSYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNA 486
RPS+SLLLPSL +YN+GQLLAIYEHR+AVEGF+WGINSFDQWGVELGKSLA QVRKQL+A
Sbjct: 468 RPSLSLLLPSLTAYNVGQLLAIYEHRVAVEGFVWGINSFDQWGVELGKSLANQVRKQLHA 527
Query: 485 SRTKGEPVQGFNFSTTTVLTRYLQASSEVPADLPTSLP 372
SRT GE V+GFNFSTTTV+ +YLQ +S+VPA+LPT LP
Sbjct: 528 SRTNGEAVKGFNFSTTTVMAKYLQETSDVPAELPTKLP 565
>pir||T09154 glucose-6-phosphate isomerase (EC 5.3.1.9), cytosol - spinach
gi|3413513|emb|CAA03983.1| glucose-6-phosphate isomerase
[Spinacia oleracea]
Length = 566
Score = 169 bits (429), Expect = 2e-41
Identities = 79/98 (80%), Positives = 91/98 (92%)
Frame = -1
Query: 665 RPSISLLLPSLNSYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNA 486
RPS+SLLLPSL +YN+GQLLAIYEHR+AVEGF+WGINSFDQWGVELGKSLA QVRKQL+A
Sbjct: 469 RPSLSLLLPSLTAYNVGQLLAIYEHRVAVEGFVWGINSFDQWGVELGKSLANQVRKQLHA 528
Query: 485 SRTKGEPVQGFNFSTTTVLTRYLQASSEVPADLPTSLP 372
SRT GE V+GFNFSTTTV+ +YLQ +S+VPA+LPT LP
Sbjct: 529 SRTNGEAVKGFNFSTTTVMAKYLQETSDVPAELPTKLP 566
>sp|P54240|G6P1_CLAXA Glucose-6-phosphate isomerase, cytosolic 1 (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI)
gi|1364077|pir||S57830 glucose-6-phosphate isomerase (EC
5.3.1.9) isoenzyme 1, cytosolic - Clarkia xantiana
gi|784974|emb|CAA56693.1| glucose-6-phosphate isomerase
[Clarkia xantiana] gi|1370068|emb|CAA61566.1|
glucose-6-phosphate isomerase [Clarkia xantiana]
Length = 568
Score = 169 bits (427), Expect = 4e-41
Identities = 80/100 (80%), Positives = 93/100 (93%)
Frame = -1
Query: 665 RPSISLLLPSLNSYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNA 486
RPSIS+LLP+L++Y IGQLLAIYEHR+AV+GF+WGINSFDQWGVELGKSLATQVRKQL+A
Sbjct: 469 RPSISILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKSLATQVRKQLHA 528
Query: 485 SRTKGEPVQGFNFSTTTVLTRYLQASSEVPADLPTSLPKI 366
SR KGEPV+GFNFST T+LTRYL+A+S+VPAD T LP I
Sbjct: 529 SRVKGEPVEGFNFSTKTLLTRYLEATSDVPADPSTLLPNI 568
>sp|P54236|G6P1_CLAFR Glucose-6-phosphate isomerase, cytosolic 1 (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI)
gi|1370053|emb|CAA61576.1| glucose-6-phosphate isomerase
[Clarkia franciscana]
Length = 568
Score = 168 bits (425), Expect = 7e-41
Identities = 79/100 (79%), Positives = 93/100 (93%)
Frame = -1
Query: 665 RPSISLLLPSLNSYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNA 486
RPS+S+LLP+L++Y IGQLLAIYEHR+AV+GF+WGINSFDQWGVELGKSLATQVRKQL+A
Sbjct: 469 RPSLSILLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKSLATQVRKQLHA 528
Query: 485 SRTKGEPVQGFNFSTTTVLTRYLQASSEVPADLPTSLPKI 366
SR KGEPV+GFNFST T+LTRYL+A+S+VPAD T LP I
Sbjct: 529 SRVKGEPVEGFNFSTKTLLTRYLEATSDVPADPSTLLPNI 568
>sp|P54239|G6P1_CLAWI Glucose-6-phosphate isomerase, cytosolic 1 (GPI) (Phosphoglucose
isomerase) (PGI) (Phosphohexose isomerase) (PHI)
gi|1370066|emb|CAA61574.1| glucose-6-phosphate isomerase
[Clarkia williamsonii]
Length = 568
Score = 168 bits (425), Expect = 7e-41
Identities = 80/100 (80%), Positives = 92/100 (92%)
Frame = -1
Query: 665 RPSISLLLPSLNSYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNA 486
RPSISLLLP+L++Y IGQLLAIYEHR+AV+GF+WGINSFDQWGVELGKSLATQVRKQL+
Sbjct: 469 RPSISLLLPTLDAYRIGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKSLATQVRKQLHG 528
Query: 485 SRTKGEPVQGFNFSTTTVLTRYLQASSEVPADLPTSLPKI 366
SR KGEPV+GFNFST T+LTRYL+A+S+VPAD T LP I
Sbjct: 529 SRVKGEPVEGFNFSTKTLLTRYLEATSDVPADPSTLLPNI 568
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 517,382,715
Number of Sequences: 1393205
Number of extensions: 10473957
Number of successful extensions: 31760
Number of sequences better than 10.0: 432
Number of HSP's better than 10.0 without gapping: 30607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31713
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
