Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002456A_C01 KMC002456A_c01
(1058 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187310.1| galactose kinase; protein id: At3g06580.1, supp... 504 e-141
pir||T51592 galactokinase (EC 2.7.1.6) [validated] - Arabidopsis... 502 e-141
gb|AAF15552.1| galactokinase GAL1 [Arabidopsis thaliana] 502 e-141
emb|CAA68163.1| galactokinase [Arabidopsis thaliana] 436 e-121
gb|AAH44977.1| Similar to galactokinase 2 [Xenopus laevis] 230 3e-59
>ref|NP_187310.1| galactose kinase; protein id: At3g06580.1, supported by cDNA:
gi_2736185 [Arabidopsis thaliana]
gi|12643845|sp|Q9SEE5|GAL1_ARATH Galactokinase (Galactose
kinase) gi|12322687|gb|AAG51339.1|AC020580_19 galactose
kinase; 34500-37226 [Arabidopsis thaliana]
gi|22531036|gb|AAM97022.1| galactose kinase [Arabidopsis
thaliana]
Length = 496
Score = 504 bits (1297), Expect = e-141
Identities = 249/317 (78%), Positives = 282/317 (88%)
Frame = +2
Query: 2 AIMAAFDVNFPKKEIAQVTCDCERHIGTQSGGMDQAISVMAKTGFAKLIDFNPIRATDVQ 181
AIMA F NF KKE+AQ+TC+CERHIGTQSGGMDQAIS+MAKTGFA+LIDFNP+RATDV+
Sbjct: 177 AIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVK 236
Query: 182 LPAGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKLGMEPEEAISKVKTLSD 361
LP GG+FVIAHSLAESQKAVTAA NYNNRVVEC LASI+L +KLGMEP+EAISKVKTLSD
Sbjct: 237 LPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSD 296
Query: 362 VEGLCVAFAGTQNSSDPVLAVKEYLKEEPYTAEEIEEVTGQKLTSFLNINASYLAVIQAA 541
VEGLCV+FAG + SSDP+LAVKEYLKEEPYTAEEIE++ +KL S +N + + LAV+ AA
Sbjct: 297 VEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAA 356
Query: 542 KQYKLHQRAAHVYSEARRVHAFKDVVSSNLSDEEKLMKLGDLMNESHYSCSVLYECSCPE 721
+KLHQRAAHVYSEARRVH FKD V+SNLSDEEKL KLGDLMNESHYSCSVLYECSCPE
Sbjct: 357 THFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPE 416
Query: 722 LEELVNICRDNGALGARLTGAGWGGCAVALVKESIVPXFILNLKEGFYXSRMDKGVIKKN 901
LEELV +C++NGALGARLTGAGWGGCAVALVKE V FI +KE +Y R++KGV+KK
Sbjct: 417 LEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYYKKRVEKGVVKKE 476
Query: 902 DLGLYVFASKPSSGAAI 952
D+ LY+FASKPSSGAAI
Sbjct: 477 DMELYLFASKPSSGAAI 493
>pir||T51592 galactokinase (EC 2.7.1.6) [validated] - Arabidopsis thaliana
gi|2736186|gb|AAB94084.1| galactose kinase [Arabidopsis
thaliana]
Length = 496
Score = 502 bits (1293), Expect = e-141
Identities = 248/317 (78%), Positives = 281/317 (88%)
Frame = +2
Query: 2 AIMAAFDVNFPKKEIAQVTCDCERHIGTQSGGMDQAISVMAKTGFAKLIDFNPIRATDVQ 181
AIMA F NF KKE+AQ+TC+CERHIGTQSGGMDQAIS+MAKTGFA+LIDFNP+RATDV+
Sbjct: 177 AIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVK 236
Query: 182 LPAGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKLGMEPEEAISKVKTLSD 361
LP GG+FVIAHSLAESQKAVTAA NYNNRVVEC LASI+L +KLGMEP+EAISKVKTLSD
Sbjct: 237 LPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSD 296
Query: 362 VEGLCVAFAGTQNSSDPVLAVKEYLKEEPYTAEEIEEVTGQKLTSFLNINASYLAVIQAA 541
VEGLCV+FAG + SSDP+LAVKEYLKEEPYTAEEIE++ +KL S +N + + L V+ AA
Sbjct: 297 VEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLTVLNAA 356
Query: 542 KQYKLHQRAAHVYSEARRVHAFKDVVSSNLSDEEKLMKLGDLMNESHYSCSVLYECSCPE 721
+KLHQRAAHVYSEARRVH FKD V+SNLSDEEKL KLGDLMNESHYSCSVLYECSCPE
Sbjct: 357 THFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPE 416
Query: 722 LEELVNICRDNGALGARLTGAGWGGCAVALVKESIVPXFILNLKEGFYXSRMDKGVIKKN 901
LEELV +C++NGALGARLTGAGWGGCAVALVKE V FI +KE +Y R++KGV+KK
Sbjct: 417 LEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYYKKRVEKGVVKKE 476
Query: 902 DLGLYVFASKPSSGAAI 952
D+ LY+FASKPSSGAAI
Sbjct: 477 DMELYLFASKPSSGAAI 493
>gb|AAF15552.1| galactokinase GAL1 [Arabidopsis thaliana]
Length = 496
Score = 502 bits (1292), Expect = e-141
Identities = 248/317 (78%), Positives = 281/317 (88%)
Frame = +2
Query: 2 AIMAAFDVNFPKKEIAQVTCDCERHIGTQSGGMDQAISVMAKTGFAKLIDFNPIRATDVQ 181
AIMA F NF KKE+AQ+TC+CERHIGTQSGGMDQAIS+MAKTGFA+LIDFNP+RATDV+
Sbjct: 177 AIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVK 236
Query: 182 LPAGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKLGMEPEEAISKVKTLSD 361
LP GG+FVIAHSLAESQKAVTAA NYNNRVVEC LASI+L +KLGMEP+EAISKVKTLSD
Sbjct: 237 LPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSD 296
Query: 362 VEGLCVAFAGTQNSSDPVLAVKEYLKEEPYTAEEIEEVTGQKLTSFLNINASYLAVIQAA 541
VEGLCV+FAG + SSDP+LAVKEYLKEEPYTAEEIE++ +KL S +N + + LAV+ AA
Sbjct: 297 VEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNAA 356
Query: 542 KQYKLHQRAAHVYSEARRVHAFKDVVSSNLSDEEKLMKLGDLMNESHYSCSVLYECSCPE 721
+KLHQRAAHVYSEARRVH FKD V+SNLSDEEKL KLGDLMNESHYSCSVLYECSCPE
Sbjct: 357 THFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNESHYSCSVLYECSCPE 416
Query: 722 LEELVNICRDNGALGARLTGAGWGGCAVALVKESIVPXFILNLKEGFYXSRMDKGVIKKN 901
LEELV +C++NG LGARLTGAGWGGCAVALVKE V FI +KE +Y R++KGV+KK
Sbjct: 417 LEELVQVCKENGPLGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYYKKRVEKGVVKKE 476
Query: 902 DLGLYVFASKPSSGAAI 952
D+ LY+FASKPSSGAAI
Sbjct: 477 DMELYLFASKPSSGAAI 493
>emb|CAA68163.1| galactokinase [Arabidopsis thaliana]
Length = 497
Score = 436 bits (1121), Expect = e-121
Identities = 221/318 (69%), Positives = 258/318 (80%), Gaps = 1/318 (0%)
Frame = +2
Query: 2 AIMAAFDVNFPKKEIAQVTCDCERHIGTQSGGMDQAISVMAKTGFAKLIDFNPIRATDVQ 181
AIMA F NF KKE+AQ+TC+CERHIGTQSGGMDQAIS+MAKTGFA+LIDFNP+RATDV+
Sbjct: 177 AIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVK 236
Query: 182 LPAGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASI-VLAIKLGMEPEEAISKVKTLS 358
LP GG+FVIAHSLAESQKAVTAA NYNNRVVEC LAS L + ++ K++
Sbjct: 237 LPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASDQYLVLSSEWNQKKQYQKLRLFL 296
Query: 359 DVEGLCVAFAGTQNSSDPVLAVKEYLKEEPYTAEEIEEVTGQKLTSFLNINASYLAVIQA 538
AG + SSDP+LAVKEYLKEEPYTAEEIE++ +KL S +N + + LAV+ A
Sbjct: 297 MWRDYVCHSAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKLPSIVNNDPTSLAVLNA 356
Query: 539 AKQYKLHQRAAHVYSEARRVHAFKDVVSSNLSDEEKLMKLGDLMNESHYSCSVLYECSCP 718
A +KLHQRAAHVYSEARRVH FKD V+SNLSDEEKL KLGDLMNE+HYSCSVLYECSCP
Sbjct: 357 ATHFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKLGDLMNETHYSCSVLYECSCP 416
Query: 719 ELEELVNICRDNGALGARLTGAGWGGCAVALVKESIVPXFILNLKEGFYXSRMDKGVIKK 898
ELEELV +C++NGALGARLTGAGWGGCAVALVKE V FI +KE ++ R++KGV+KK
Sbjct: 417 ELEELVQVCKENGALGARLTGAGWGGCAVALVKEFDVTQFIPAVKEKYHNKRVEKGVVKK 476
Query: 899 NDLGLYVFASKPSSGAAI 952
D+ LY+F SKPSSG+AI
Sbjct: 477 EDMELYLFGSKPSSGSAI 494
>gb|AAH44977.1| Similar to galactokinase 2 [Xenopus laevis]
Length = 460
Score = 230 bits (586), Expect = 3e-59
Identities = 136/316 (43%), Positives = 194/316 (61%)
Frame = +2
Query: 8 MAAFDVNFPKKEIAQVTCDCERHIGTQSGGMDQAISVMAKTGFAKLIDFNPIRATDVQLP 187
+ A ++ K E+A+ CE++IGT+ GGMDQ+IS +A+ G AKLI+F+P+R+TDV+LP
Sbjct: 160 LIANKMSLSKVELAETCAKCEQYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRSTDVKLP 219
Query: 188 AGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKLGMEPEEAISKVKTLSDVE 367
AG FVIA+S E KA T+ ++N RV+EC LA+ ++A G++ + + L D++
Sbjct: 220 AGAVFVIANSCVEMNKAATS--HFNIRVMECRLATKIIAKARGLDWKNLMK----LGDLQ 273
Query: 368 GLCVAFAGTQNSSDPVLAVKEYLKEEPYTAEEIEEVTGQKLTSFLNINASYLAVIQAAKQ 547
A G N D + V+E L EPYT EEI + G L L S Q
Sbjct: 274 ----AKLGV-NFEDIMAIVEEILHPEPYTREEICDCLGISLEELLEKILSQNT--QDVST 326
Query: 548 YKLHQRAAHVYSEARRVHAFKDVVSSNLSDEEKLMKLGDLMNESHYSCSVLYECSCPELE 727
+KL+QRA HVYSEA RV AFK V ++ +L LGDLMN SH SC +YECSCPEL+
Sbjct: 327 FKLYQRAKHVYSEAARVLAFKKVCDEAPANAVQL--LGDLMNRSHVSCRDMYECSCPELD 384
Query: 728 ELVNICRDNGALGARLTGAGWGGCAVALVKESIVPXFILNLKEGFYXSRMDKGVIKKNDL 907
+LV+IC +GA+G+RLTGAGWGGC+V++V E + F+ +++ +Y + K L
Sbjct: 385 QLVDICLKSGAVGSRLTGAGWGGCSVSMVPEDKLGDFLSKVQDAYYKLEDRMFALLKTSL 444
Query: 908 GLYVFASKPSSGAAII 955
FA+ P GA ++
Sbjct: 445 ----FATNPGCGAMVL 456
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 899,833,840
Number of Sequences: 1393205
Number of extensions: 20114879
Number of successful extensions: 66264
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 62829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66119
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 62912456556
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
