Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002452A_C01 KMC002452A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P17928|CALM_MEDSA Calmodulin gi|71683|pir||MCAA calmodulin - ... 217 8e-56
ref|NP_189967.1| calmodulin 7; protein id: At3g43810.1, supporte... 217 8e-56
emb|CAA46150.1| calmodulin [Oryza sativa] gi|3336950|emb|CAA7430... 217 8e-56
sp|P93171|CALM_HELAN CALMODULIN gi|1773321|gb|AAB68399.1| calmod... 217 8e-56
sp|P13565|CALM_HORVU CALMODULIN gi|231682|sp|P29612|CALM_ORYSA C... 217 8e-56
>sp|P17928|CALM_MEDSA Calmodulin gi|71683|pir||MCAA calmodulin - alfalfa
gi|19579|emb|CAA36644.1| calmodulin (AA 1-149) [Medicago
sativa] gi|170070|gb|AAA34013.1| calmodulin
gi|170074|gb|AAA34014.1| calmodulin
gi|506852|gb|AAA34238.1| calmodulin [Vigna radiata]
gi|4103957|gb|AAD10244.1| calmodulin [Phaseolus
vulgaris] gi|21913287|gb|AAM81203.1|AF494220_1
calmodulin 2 [Medicago truncatula]
gi|1583767|prf||2121384A calmodulin
gi|1583769|prf||2121384C calmodulin
Length = 149
Score = 217 bits (552), Expect = 8e-56
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = -3
Query: 532 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 353
QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Query: 352 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 209
SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 66.2 bits (160), Expect = 2e-10
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = -3
Query: 439 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 260
MA ++ D + E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 259 GDGQINYEEFVKVMMAK 209
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
>ref|NP_189967.1| calmodulin 7; protein id: At3g43810.1, supported by cDNA: 7008.,
supported by cDNA: gi_5825597 [Arabidopsis thaliana]
gi|115484|sp|P27162|CAL1_PETHY Calmodulin 1
gi|27805429|sp|P59220|CAL7_ARATH Calmodulin-7
gi|71684|pir||MCPZDC calmodulin - carrot
gi|478632|pir||S22971 calmodulin - trumpet lily
gi|541839|pir||S40301 calmodulin - red bryony
gi|2129970|pir||S70768 calmodulin CAM81 - garden petunia
gi|11276996|pir||T47417 calmodulin 7 [similarity] -
Arabidopsis thaliana gi|18326|emb|CAA42423.1| calmodulin
[Daucus carota] gi|19447|emb|CAA78301.1| calmodulin
[Lilium longiflorum] gi|169207|gb|AAA33706.1| calmodulin
gi|308900|gb|AAA33397.1| calmodulin
gi|505154|emb|CAA43143.1| Calmodulin [Malus x domestica]
gi|535444|gb|AAA92681.1| calmodulin
gi|5825598|gb|AAD53313.1|AF178073_1 calmodulin 7
[Arabidopsis thaliana] gi|7362781|emb|CAB83153.1|
calmodulin 7 [Arabidopsis thaliana]
gi|9992891|gb|AAG11418.1|AF292108_1 calmodulin [Prunus
avium] gi|11036952|gb|AAG27432.1| calmodulin [Elaeis
guineensis] gi|14625405|dbj|BAB61909.1| calmodulin
NtCaM3 [Nicotiana tabacum] gi|14625407|dbj|BAB61910.1|
calmodulin NtCaM4 [Nicotiana tabacum]
gi|14625409|dbj|BAB61911.1| calmodulin NtCaM5 [Nicotiana
tabacum] gi|14625411|dbj|BAB61912.1| calmodulin NtCaM6
[Nicotiana tabacum] gi|14625413|dbj|BAB61913.1|
calmodulin NtCaM7 [Nicotiana tabacum]
gi|14625415|dbj|BAB61914.1| calmodulin NtCaM8 [Nicotiana
tabacum] gi|14625421|dbj|BAB61917.1| calmodulin NtCaM11
[Nicotiana tabacum] gi|14625423|dbj|BAB61918.1|
calmodulin NtCaM12 [Nicotiana tabacum]
gi|21594484|gb|AAM66013.1| calmodulin 7 [Arabidopsis
thaliana] gi|21913285|gb|AAM81202.1|AF494219_1
calmodulin 1 [Medicago truncatula]
gi|445602|prf||1909349A calmodulin
Length = 149
Score = 217 bits (552), Expect = 8e-56
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = -3
Query: 532 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 353
QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Query: 352 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 209
SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 67.8 bits (164), Expect = 8e-11
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -3
Query: 439 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 260
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 259 GDGQINYEEFVKVMMAK 209
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
>emb|CAA46150.1| calmodulin [Oryza sativa] gi|3336950|emb|CAA74307.1| calmodulin
[Zea mays] gi|4103961|gb|AAD10246.1| calmodulin
[Phaseolus vulgaris]
Length = 149
Score = 217 bits (552), Expect = 8e-56
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = -3
Query: 532 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 353
QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Query: 352 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 209
SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 65.9 bits (159), Expect = 3e-10
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = -3
Query: 439 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 260
MA ++ D + E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-EQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 259 GDGQINYEEFVKVMMAK 209
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
>sp|P93171|CALM_HELAN CALMODULIN gi|1773321|gb|AAB68399.1| calmodulin [Helianthus annuus]
Length = 149
Score = 217 bits (552), Expect = 8e-56
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = -3
Query: 532 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 353
QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Query: 352 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 209
SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 66.6 bits (161), Expect = 2e-10
Identities = 32/69 (46%), Positives = 45/69 (64%)
Frame = -3
Query: 415 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 236
D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 235 EFVKVMMAK 209
EF+ +M K
Sbjct: 68 EFLNLMARK 76
>sp|P13565|CALM_HORVU CALMODULIN gi|231682|sp|P29612|CALM_ORYSA CALMODULIN
gi|71682|pir||MCBH calmodulin - barley
gi|100666|pir||S24952 calmodulin 1 (clone lambda DASH) -
rice gi|20188|emb|CAA78287.1| calmodulin [Oryza sativa]
gi|167008|gb|AAA32938.1| calmodulin
gi|170072|gb|AAA03580.1| calmodulin
gi|310315|gb|AAA33901.1| calmodulin
gi|506850|gb|AAA34237.1| calmodulin [Vigna radiata]
gi|1478370|gb|AAB36130.1| auxin-regulated calmodulin;
arCaM [Vigna radiata] gi|1742989|emb|CAA70982.1| CaM
protein [Cicer arietinum] gi|1754991|gb|AAC49578.1|
calmodulin TaCaM1-1 gi|1754993|gb|AAC49579.1| calmodulin
TaCaM1-2 gi|1754995|gb|AAC49580.1| calmodulin TaCaM1-3
gi|1755003|gb|AAC49584.1| calmodulin TaCaM3-1
gi|1755005|gb|AAC49585.1| calmodulin TaCaM3-2
gi|1755007|gb|AAC49586.1| calmodulin TaCaM3-3
gi|1755009|gb|AAC49587.1| calmodulin TaCaM4-1
gi|3617842|gb|AAC36059.1| calmodulin [Oryza sativa]
gi|6630694|dbj|BAA88540.1| unnamed protein product
[Oryza sativa (japonica cultivar-group)]
gi|17066590|gb|AAL35329.1|AF441191_1 calmodulin [Oryza
sativa] gi|22324435|dbj|BAC10352.1| calmodulin [Oryza
sativa (japonica cultivar-group)]
gi|226769|prf||1604476A calmodulin
gi|1583768|prf||2121384B calmodulin
Length = 149
Score = 217 bits (552), Expect = 8e-56
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = -3
Query: 532 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 353
QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI
Sbjct: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
Query: 352 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 209
SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 67.4 bits (163), Expect = 1e-10
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -3
Query: 439 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 260
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 259 GDGQINYEEFVKVMMAK 209
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,515,059
Number of Sequences: 1393205
Number of extensions: 10797634
Number of successful extensions: 49986
Number of sequences better than 10.0: 2448
Number of HSP's better than 10.0 without gapping: 40423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46766
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
