>KMC002443A_C01 KMC002443A_c01
gGAACAGAAGAAAACGGAAAGGTCTATACAAAAACACCATTATGTTCTTATCAGTACAAA
CAAAAAATACTTGGTGGGAATTAATCATCCAAATTATGCAGCTCTTTTGGCTACATTCAA
ATTTATTGGCTAGTTACAATATCAACAGGTTCAACCCGATCAGCCCCTGTGGAAGATTCA
TAAATCCCATTAATCCTCATCTTCACAATTCCCACCTTTCCTTTGTTCAAAAGAGTGTAT
TATACTTACATTCAAATTTCTTTCCCCTGATGAGTTCTTCAAATCTGATTGAATCAACAA
AAACACCAATATCCTTCCATCCTCTATCTATTGGACTGTTCTGTTTTCTCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002443A_C01 KMC002443A_c01
         (351 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|EAA12755.1| agCP11579 [Anopheles gambiae str. PEST]                 34  0.54
ref|NP_741760.1| Putative nuclear protein family member, nematod...    33  1.2
ref|NP_494159.1| Predicted CDS, BTB POZ domain family member [Ca...    32  1.6
gb|AAK93946.1| glutathione synthetase GSHS1 [Medicago truncatula]      32  2.0
ref|NP_777768.1| isoleucyl-tRNA synthetase [Buchnera aphidicola ...    31  3.5

>gb|EAA12755.1| agCP11579 [Anopheles gambiae str. PEST]
          Length = 351

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 31/89 (34%), Positives = 44/89 (48%), Gaps = 6/89 (6%)
 Frame = +3

Query: 87  IQIMQLFWLHSNLLASYNINRFNPISPCGRFINPI-NPHLHNSHLSFVQKSVLYL-HS-- 254
           +Q + LF  H NL   + I  FNP+    R I+PI NP  +N  L  V + ++ L HS  
Sbjct: 211 LQFLHLF--HHNLQDFHAIREFNPVDLRTRIIHPIRNPFQYNHQLQDVLQHLVNLSHSTL 268

Query: 255 NFFPL-MSSSNLIESTKTP-ISFHPLSIG 335
           N  P+ +      E+ K P  S H L +G
Sbjct: 269 NILPITLDIQRFREARKAPHHSEHQLHLG 297

>ref|NP_741760.1| Putative nuclear protein family member, nematode specific
           [Caenorhabditis elegans] gi|21629450|gb|AAA80393.2|
           Hypothetical protein ZK470.2c [Caenorhabditis elegans]
          Length = 260

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 21/62 (33%), Positives = 30/62 (47%), Gaps = 1/62 (1%)
 Frame = +3

Query: 141 INRFNPISPCGRFINPINPHLHNSHLSFVQKSVLYLHSNFFPLMSS-SNLIESTKTPISF 317
           IN   P   C R ++  +PHL   HL   Q      H +   +MS+  ++ E  KTP+S 
Sbjct: 28  INLLQPPKVCLRTMSKSDPHLDIPHLLVSQDEA---HPSLNKIMSNLQHVHEGLKTPVSS 84

Query: 318 HP 323
           HP
Sbjct: 85  HP 86

>ref|NP_494159.1| Predicted CDS, BTB POZ domain family member [Caenorhabditis
           elegans] gi|7206701|gb|AAF39860.1| Hypothetical protein
           F59H6.12 [Caenorhabditis elegans]
          Length = 208

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 17/42 (40%), Positives = 22/42 (51%)
 Frame = +3

Query: 225 VQKSVLYLHSNFFPLMSSSNLIESTKTPISFHPLSIGLFCFL 350
           V K+ L  HSNFF  + SSN  ES  T I    ++   FC +
Sbjct: 28  VSKAFLSFHSNFFRKLFSSNFKESEMTEIPIKDVTYEDFCLM 69

>gb|AAK93946.1| glutathione synthetase GSHS1 [Medicago truncatula]
          Length = 556

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 21/59 (35%), Positives = 31/59 (51%), Gaps = 1/59 (1%)
 Frame = +3

Query: 147 RFNPISPCGRFINPINPHLHNSHLSFVQKSVLYLHSNFFPLMSSSNLIESTK-TPISFH 320
           RF+   P  ++I P+ PH +N+  SF   S     S+     SSS++  STK  P+S H
Sbjct: 12  RFSKTIPLSKYIPPLQPHHNNTFFSFFPSS-----SSSSSSSSSSSINFSTKPLPMSHH 65

>ref|NP_777768.1| isoleucyl-tRNA synthetase [Buchnera aphidicola (Baizongia
           pistaciae)] gi|27904039|gb|AAO26873.1| isoleucyl-tRNA
           synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 939

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 23/64 (35%), Positives = 32/64 (49%), Gaps = 6/64 (9%)
 Frame = +3

Query: 138 NINRFNPISPCGRFINPINPHLHNSHLSFVQKSVLYLHSNFFPLMSSSNLIES------T 299
           NIN    I   G F+N I+P L+N ++    K V+ L +N   L+ S  L+ S       
Sbjct: 350 NINFTPTIDKKGHFLNNIHPKLNNINIFKSIKIVIKLLNNNNALLHSEKLVHSYPYCWRH 409

Query: 300 KTPI 311
           KTPI
Sbjct: 410 KTPI 413

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 306,124,774
Number of Sequences: 1393205
Number of extensions: 6180458
Number of successful extensions: 14196
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 13940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14196
length of database: 448,689,247
effective HSP length: 92
effective length of database: 320,514,387
effective search space used: 7692345288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GENf067c05 BP061225 1 209 2 MR051g09_f BP079969 2 355

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