Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002415A_C01 KMC002415A_c01
(516 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sanderso... 148 3e-35
gb|AAF61441.1|AF138265_1 papain-like cysteine proteinase isoform... 147 9e-35
gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas] 147 9e-35
gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform... 147 9e-35
gb|AAF40415.1|AF216784_1 papain-like cysteine proteinase isoform... 147 9e-35
>gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sandersonia aurantiaca]
Length = 360
Score = 148 bits (374), Expect = 3e-35
Identities = 64/74 (86%), Positives = 70/74 (94%)
Frame = -2
Query: 515 CPYICGKNLDHGVLLVGYGKAGYAPIRFKNQAYWIIKNSWGESWGENGYYKICRGRNVCG 336
CPYICGK+LDHGVLLVGYG AG+APIRFK + YWIIKNSWGE+WGENGYYKICRGRNVCG
Sbjct: 286 CPYICGKHLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCG 345
Query: 335 VDSMVSTVAAAHTS 294
VDSMVS+V+A HTS
Sbjct: 346 VDSMVSSVSAFHTS 359
>gb|AAF61441.1|AF138265_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
Length = 366
Score = 147 bits (370), Expect = 9e-35
Identities = 65/76 (85%), Positives = 68/76 (88%)
Frame = -2
Query: 515 CPYICGKNLDHGVLLVGYGKAGYAPIRFKNQAYWIIKNSWGESWGENGYYKICRGRNVCG 336
CPYIC K LDHGVLLVGYG AGYAPIR K + YWIIKNSWGESWGENGYYKICRGRNVCG
Sbjct: 290 CPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 349
Query: 335 VDSMVSTVAAAHTSSS 288
VDSMVSTVAA T++S
Sbjct: 350 VDSMVSTVAAVSTTTS 365
>gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas]
Length = 366
Score = 147 bits (370), Expect = 9e-35
Identities = 65/76 (85%), Positives = 68/76 (88%)
Frame = -2
Query: 515 CPYICGKNLDHGVLLVGYGKAGYAPIRFKNQAYWIIKNSWGESWGENGYYKICRGRNVCG 336
CPYIC K LDHGVLLVGYG AGYAPIR K + YWIIKNSWGESWGENGYYKICRGRNVCG
Sbjct: 290 CPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 349
Query: 335 VDSMVSTVAAAHTSSS 288
VDSMVSTVAA T++S
Sbjct: 350 VDSMVSTVAAVSTTTS 365
>gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine
proteinase isoform III [Ipomoea batatas]
Length = 366
Score = 147 bits (370), Expect = 9e-35
Identities = 65/76 (85%), Positives = 68/76 (88%)
Frame = -2
Query: 515 CPYICGKNLDHGVLLVGYGKAGYAPIRFKNQAYWIIKNSWGESWGENGYYKICRGRNVCG 336
CPYIC K LDHGVLLVGYG AGYAPIR K + YWIIKNSWGESWGENGYYKICRGRNVCG
Sbjct: 290 CPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 349
Query: 335 VDSMVSTVAAAHTSSS 288
VDSMVSTVAA T++S
Sbjct: 350 VDSMVSTVAAVSTTTS 365
>gb|AAF40415.1|AF216784_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
Length = 368
Score = 147 bits (370), Expect = 9e-35
Identities = 65/76 (85%), Positives = 68/76 (88%)
Frame = -2
Query: 515 CPYICGKNLDHGVLLVGYGKAGYAPIRFKNQAYWIIKNSWGESWGENGYYKICRGRNVCG 336
CPYIC K LDHGVLLVGYG AGYAPIR K + YWIIKNSWGESWGENGYYKICRGRNVCG
Sbjct: 292 CPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 351
Query: 335 VDSMVSTVAAAHTSSS 288
VDSMVSTVAA T++S
Sbjct: 352 VDSMVSTVAAVSTTTS 367
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,249,098
Number of Sequences: 1393205
Number of extensions: 9584973
Number of successful extensions: 21726
Number of sequences better than 10.0: 1008
Number of HSP's better than 10.0 without gapping: 20615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21084
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
