Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002411A_C01 KMC002411A_c01
(426 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_702296.1| hypothetical protein [Plasmodium falciparum 3D7... 41 0.003
gb|AAG38536.1|AF309805_1 putative a-factor pheromone receptor St... 40 0.009
pir||A54523 histidine-rich protein - Plasmodium lophurae (fragme... 39 0.020
ref|NP_702596.1| hypothetical protein [Plasmodium falciparum 3D7... 39 0.020
ref|NP_572403.1| CG12155-PA [Drosophila melanogaster] gi|7290826... 37 0.074
>ref|NP_702296.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497477|gb|AAN37020.1|AE014822_55 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 3384
Score = 41.2 bits (95), Expect = 0.003
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 HHFPECV-KYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH C Y HN H+ HNHN + HSH HN HN H
Sbjct: 608 HHNYHCHHNYHNHHNEHNNHNEHNHNNE-HSHHNEHNHHNEH 648
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 659 HHNHHNHHNHHNHHNHHNHHNHHNHH 684
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 665 HHNHHNHHNHHNHHNHHNHHNHHNHH 690
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 662 HHNHHNHHNHHNHHNHHNHHNHHNHH 687
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 656 HHNHHNHHNHHNHHNHHNHHNHHNHH 681
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 668 HHNHHNHHNHHNHHNHHNHHNHHNHH 693
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 671 HHNHHNHHNHHNHHNHHNHHNHHNEH 696
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 650 HHNHHNHHNHHNHHNHHNHHNHHNHH 675
Score = 37.4 bits (85), Expect = 0.043
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+H HN HN H
Sbjct: 653 HHNHHNHHNHHNHHNHHNHHNHHNHH 678
Score = 36.6 bits (83), Expect = 0.074
Identities = 13/42 (30%), Positives = 22/42 (51%)
Frame = +2
Query: 299 AHHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
+HH C + ++ HHN++ + H+H HN+HN H
Sbjct: 589 SHHNYHCHHNYHCHHNYHNHHNYHCHHNYHNHHNEHNNHNEH 630
Score = 35.0 bits (79), Expect = 0.22
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
HN H++HNH+ H+H HN HN H
Sbjct: 645 HNEHNHHNHHNH-HNHHNHHNHHNHH 669
Score = 34.7 bits (78), Expect = 0.28
Identities = 11/24 (45%), Positives = 16/24 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHN 418
H+ HHNH+++ H+H HN HN
Sbjct: 674 HHNHHNHHNHHNHHNHHNHHNEHN 697
Score = 34.7 bits (78), Expect = 0.28
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
HN HHNH+++ H+H HN HN H
Sbjct: 648 HN-HHNHHNHHNHHNHHNHHNHHNHH 672
Score = 34.3 bits (77), Expect = 0.37
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
HN H+ HNH+ H+H HN HN H
Sbjct: 642 HNHHNEHNHHNH-HNHHNHHNHHNHH 666
Score = 33.9 bits (76), Expect = 0.48
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HNH++ H+H HN HN H
Sbjct: 638 HHNEHNHHNEHNHHNHHNHHNHHNHH 663
Score = 32.3 bits (72), Expect = 1.4
Identities = 10/26 (38%), Positives = 17/26 (64%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
H+ HHNH+++ H+HL + H+ H
Sbjct: 683 HHNHHNHHNHHNEHNHLNSIHLHSNH 708
Score = 32.0 bits (71), Expect = 1.8
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Frame = +2
Query: 299 AHHFPE-------CVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
AHH + C + + HN H +HN+ H H HN HN H
Sbjct: 568 AHHTKQKKNSDHNCHSHHNYHSHHNYHCHHNY----HCHHNYHNHHNYH 612
Score = 30.4 bits (67), Expect = 5.3
Identities = 11/41 (26%), Positives = 21/41 (50%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH C + ++ HHN++++ H++ HN +N H
Sbjct: 596 HHNYHCHHNYHNHHNYHCHHNYHNHHNEHNNHNEHNHNNEH 636
>gb|AAG38536.1|AF309805_1 putative a-factor pheromone receptor Ste3a [Pneumocystis carinii f.
sp. carinii]
Length = 439
Score = 39.7 bits (91), Expect = 0.009
Identities = 15/26 (57%), Positives = 17/26 (64%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
HN +HNHNHN H+H HN HN H
Sbjct: 381 HNNNHNHNHNHN-HNHNHNHNHHNNH 405
Score = 36.2 bits (82), Expect = 0.097
Identities = 14/26 (53%), Positives = 17/26 (64%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
HN +HNHNHN H+H +N HN H
Sbjct: 385 HNHNHNHNHNHN-HNHNHHNNHHNNH 409
Score = 36.2 bits (82), Expect = 0.097
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHN 418
HN +HNHNHN + H HN+HN
Sbjct: 391 HNHNHNHNHNHHNNHHNNHHNNHN 414
Score = 33.5 bits (75), Expect = 0.63
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
HN +HNHNHN H++ +N HN H
Sbjct: 389 HNHNHNHNHNHNHHNNHH-NNHHNNH 413
Score = 30.8 bits (68), Expect = 4.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 347 HNTHHNHNHNQKVHSHLRIHNSHNRH 424
+ H+NHN+N H+H HN ++ H
Sbjct: 366 YTDHNNHNNNHNNHNHNNNHNHNHNH 391
>pir||A54523 histidine-rich protein - Plasmodium lophurae (fragment)
gi|552196|gb|AAA29616.1| histidine-rich protein
[Plasmodium lophurae]
Length = 140
Score = 38.5 bits (88), Expect = 0.020
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH P +F H+ HH+H+H+ H H H++H+ H
Sbjct: 70 HHHP----WFHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHH 106
Score = 34.3 bits (77), Expect = 0.37
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH + H+ HH+H+H+ H H H++H+ H
Sbjct: 76 HHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHH 116
Score = 32.0 bits (71), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH P +F H H+H+H+ H H H++H+ H
Sbjct: 61 HHHP----WFHHHHHHPWFHHHHHHDAHHHHHHHHDAHHHH 97
Score = 31.6 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH P + H+ HH+H + H H H+ H+ H
Sbjct: 5 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 45
Score = 31.2 bits (69), Expect = 3.1
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH + H+ HH+H+H+ H H H+ + H
Sbjct: 95 HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHH 135
Score = 30.4 bits (67), Expect = 5.3
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH + H HH+H+H+ H H H++ + H
Sbjct: 11 HHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHH 51
Score = 30.4 bits (67), Expect = 5.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 HHNHNHNQKVHSHLRIHNSHNRH 424
HH+H+H+ H H H++H+ H
Sbjct: 114 HHHHHHHDAHHHHHHHHDAHHHH 136
Score = 30.4 bits (67), Expect = 5.3
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 302 HHFPECVKYFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
HH + H HH+H+H+ H H H++ + H
Sbjct: 1 HHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHH 41
>ref|NP_702596.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497782|gb|AAN37320.1|AE014827_63 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 852
Score = 38.5 bits (88), Expect = 0.020
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 326 YFKFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
YF +N HNHN+ +H+H IHN HN +
Sbjct: 120 YFSSYNNNNNIHNHNNIHNIHNHNNIHNIHNHN 152
Score = 30.0 bits (66), Expect = 6.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 332 KFVKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
K+++ + + +N+N+N +H+H IHN HN +
Sbjct: 115 KYLENYFSSYNNNNN--IHNHNNIHNIHNHN 143
Score = 29.6 bits (65), Expect = 9.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 347 HNTH-HNHNHNQKVHSHLRIHNSHN 418
HN H HN+ HN H++ IHN HN
Sbjct: 137 HNIHNHNNIHNIHNHNNHNIHNIHN 161
>ref|NP_572403.1| CG12155-PA [Drosophila melanogaster] gi|7290826|gb|AAF46269.1|
CG12155-PA [Drosophila melanogaster]
gi|17863012|gb|AAL39983.1| SD08447p [Drosophila
melanogaster]
Length = 555
Score = 36.6 bits (83), Expect = 0.074
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 338 VKRHNTHHNHNHNQKVHSHLRIHNSHNRH 424
V +H+ HH+H H+Q+ H H H+ H+ H
Sbjct: 211 VSQHHHHHHHGHHQQEHHHQPHHHHHHHH 239
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 334,992,911
Number of Sequences: 1393205
Number of extensions: 6225164
Number of successful extensions: 27199
Number of sequences better than 10.0: 180
Number of HSP's better than 10.0 without gapping: 18407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24318
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 6856422288
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
