Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002394A_C02 KMC002394A_c02
(639 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidn... 174 1e-42
pir||S24602 cysteine proteinase tpp (EC 3.4.22.-) - garden pea g... 165 4e-40
gb|AAD28476.1|AF133838_1 papain-like cysteine protease [Sanderso... 158 5e-38
sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor gi|67644|pir|... 157 9e-38
dbj|BAA88898.1| cysteine protease component of protease-inhibito... 150 1e-35
>pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidney bean
gi|2511693|emb|CAB17076.1| cysteine proteinase precursor
[Phaseolus vulgaris]
Length = 455
Score = 174 bits (440), Expect = 1e-42
Identities = 67/90 (74%), Positives = 79/90 (87%)
Frame = -3
Query: 634 PPSVCDNYYSCAEATTCCCIYEYGNSCFEWGCCPLEGATCCDDHYSCCPSDYPVCDTYRG 455
PP+VCDNYYSC+++ TCCCI+E+G +CFEWGCCPLEGATCCDDHYSCCP DYP+C+TY G
Sbjct: 362 PPNVCDNYYSCSDSATCCCIFEFGKTCFEWGCCPLEGATCCDDHYSCCPHDYPICNTYAG 421
Query: 454 LCLKGSNNPFGVKALKRTPAKPNLAFGVKK 365
CL+ NNPFGVKAL+RTPAKP+ AF K
Sbjct: 422 TCLRSKNNPFGVKALRRTPAKPHGAFAGNK 451
>pir||S24602 cysteine proteinase tpp (EC 3.4.22.-) - garden pea
gi|3980198|emb|CAA46863.1| thiolprotease [Pisum sativum]
Length = 464
Score = 165 bits (418), Expect = 4e-40
Identities = 68/91 (74%), Positives = 75/91 (81%)
Frame = -3
Query: 634 PPSVCDNYYSCAEATTCCCIYEYGNSCFEWGCCPLEGATCCDDHYSCCPSDYPVCDTYRG 455
PPSVCD+Y SCAE +TCCCI++YG SCFEWGCCPLE ATCCDDHYSCCP +YPVCDTY G
Sbjct: 371 PPSVCDSY-SCAEGSTCCCIFDYGGSCFEWGCCPLESATCCDDHYSCCPHEYPVCDTYAG 429
Query: 454 LCLKGSNNPFGVKALKRTPAKPNLAFGVKKK 362
LC K NNP GVK+ KRTPAKP+ A K K
Sbjct: 430 LCRKNKNNPLGVKSFKRTPAKPHFAIEGKNK 460
>gb|AAD28476.1|AF133838_1 papain-like cysteine protease [Sandersonia aurantiaca]
Length = 370
Score = 158 bits (400), Expect = 5e-38
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3
Query: 634 PPSVCDNYYSCAEATTCCCIYEYGNSCFEWGCCPLEGATCCDDHYSCCPSDYPVCDTYRG 455
PPSVCDNYYSC E++TCCC+++YG SCF WGCCPLEGATCCDDH SCCP D+P+C+ +G
Sbjct: 275 PPSVCDNYYSCPESSTCCCLFQYGRSCFAWGCCPLEGATCCDDHSSCCPHDFPICNVQQG 334
Query: 454 LCLKGSNNPFGVKALKRTPAKPN 386
LCLK NNP GVKAL RTPA P+
Sbjct: 335 LCLKSKNNPLGVKALARTPAIPS 357
>sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor gi|67644|pir||KHRZOA oryzain (EC
3.4.22.-) alpha precursor - rice
gi|218181|dbj|BAA14402.1| unnamed protein product [Oryza
sativa (japonica cultivar-group)]
Length = 458
Score = 157 bits (398), Expect = 9e-38
Identities = 63/96 (65%), Positives = 75/96 (77%)
Frame = -3
Query: 634 PPSVCDNYYSCAEATTCCCIYEYGNSCFEWGCCPLEGATCCDDHYSCCPSDYPVCDTYRG 455
PP+VCDNYY+C ++TTCCCIYEYG C+ WGCCPLEGATCCDDHYSCCP +YP+C+ +G
Sbjct: 363 PPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQG 422
Query: 454 LCLKGSNNPFGVKALKRTPAKPNLAFGVKKKKISDA 347
CL ++P VKALKRT AKPNL+F K S A
Sbjct: 423 TCLMAKDSPLAVKALKRTLAKPNLSFLFGNGKKSSA 458
>dbj|BAA88898.1| cysteine protease component of protease-inhibitor complex [Zea
mays]
Length = 465
Score = 150 bits (380), Expect = 1e-35
Identities = 61/86 (70%), Positives = 70/86 (80%), Gaps = 1/86 (1%)
Frame = -3
Query: 631 PSVCDNYYSCAEATTCCCIYEYGNSCFEWGCCPLEGATCCDDHYSCCPSDYPVCDTYRGL 452
P+VCDNYYSC ++TTCCCIYEYG CF WGCCPLEGATCCDDHYSCCP DYP+C+ +G
Sbjct: 368 PAVCDNYYSCPDSTTCCCIYEYGKYCFAWGCCPLEGATCCDDHYSCCPHDYPICNVRQGT 427
Query: 451 CLKGSNNP-FGVKALKRTPAKPNLAF 377
CL G ++P VKA KRT AKP+ AF
Sbjct: 428 CLMGKDSPLLSVKATKRTLAKPHWAF 453
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,342,544
Number of Sequences: 1393205
Number of extensions: 12573434
Number of successful extensions: 40442
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 37731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40145
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
