Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002384A_C02 KMC002384A_c02
(649 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_702687.1| hypothetical protein [Plasmodium falciparum 3D7... 36 0.51
sp|P23269|OLF0_RAT OLFACTORY RECEPTOR-LIKE PROTEIN I3 gi|112098|... 35 0.87
ref|XP_220673.1| similar to olfactory receptor MOR135-7 [Mus mus... 34 1.9
ref|NP_667219.1| olfactory receptor MOR135-7 [Mus musculus] gi|1... 33 2.5
ref|XP_111111.1| similar to olfactory receptor I3 - rat [Mus mus... 33 2.5
>ref|NP_702687.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23498153|emb|CAD49125.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 3787
Score = 35.8 bits (81), Expect = 0.51
Identities = 24/84 (28%), Positives = 38/84 (44%), Gaps = 15/84 (17%)
Frame = +1
Query: 22 VTSLFDGDPRWMPSHVSNLINQTEPHNLSKNM-------SHKK--------DGDKNKQFF 156
VTS+F+ D + +++N N + P+N KNM ++KK D D K+
Sbjct: 1342 VTSIFNVDNKMHEYNMNNTGNMSIPNNKRKNMDIMNEPLNYKKNKVLQKGDDNDMEKEII 1401
Query: 157 FARHYNGTRKKNNSYTII*HVWNN 228
H N NN Y +++NN
Sbjct: 1402 SPGHINNNHNNNNIYNNNNNIYNN 1425
>sp|P23269|OLF0_RAT OLFACTORY RECEPTOR-LIKE PROTEIN I3 gi|112098|pir||E23701 olfactory
receptor I3 - rat gi|205832|gb|AAA41748.1| olfactory
protein
Length = 310
Score = 35.0 bits (79), Expect = 0.87
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = -2
Query: 318 CLEILLQSILKS*SILSTLLGFRIDFEENEVVPNMLNDSV*IVLFSCAIVMPGKKKLLVL 139
CL +LL + S +++ TLL R+ F EN VV N D ++ +C+ + + ++
Sbjct: 141 CLVLLLWMLTTSHAMMHTLLAARLSFCENNVVLNFFCDLFVLLKLACSDTYINELMIFIM 200
Query: 138 VTIFFMGHVFTQIVRFSLI 82
T+ + F ++ ++ I
Sbjct: 201 STLLIIIPFFLIVMSYARI 219
>ref|XP_220673.1| similar to olfactory receptor MOR135-7 [Mus musculus] [Rattus
norvegicus]
Length = 311
Score = 33.9 bits (76), Expect = 1.9
Identities = 22/83 (26%), Positives = 40/83 (47%)
Frame = -2
Query: 327 FSACLEILLQSILKS*SILSTLLGFRIDFEENEVVPNMLNDSV*IVLFSCAIVMPGKKKL 148
F CL +LL + S +++ TLL R+ F +N V+ N D ++ +C+ +
Sbjct: 138 FCTCLVLLLWMLTTSHAMMHTLLAARLSFCKNNVILNFFCDLFALLKLACSDTYINDLMI 197
Query: 147 LVLVTIFFMGHVFTQIVRFSLIY 79
L++ + F I+ F LI+
Sbjct: 198 LIMGGLIF-------IIPFLLIF 213
>ref|NP_667219.1| olfactory receptor MOR135-7 [Mus musculus]
gi|18479458|gb|AAL60743.1| olfactory receptor MOR135-7
[Mus musculus]
Length = 312
Score = 33.5 bits (75), Expect = 2.5
Identities = 19/66 (28%), Positives = 33/66 (49%)
Frame = -2
Query: 318 CLEILLQSILKS*SILSTLLGFRIDFEENEVVPNMLNDSV*IVLFSCAIVMPGKKKLLVL 139
CL +LL + S +++ TLL R+ F EN V+ N D ++ SC+ +L+
Sbjct: 143 CLMLLLWILTTSHAMMHTLLAARLSFCENNVILNFFCDLFAVLKLSCSDTYINDLMILIF 202
Query: 138 VTIFFM 121
+ F+
Sbjct: 203 GGLIFI 208
>ref|XP_111111.1| similar to olfactory receptor I3 - rat [Mus musculus]
Length = 312
Score = 33.5 bits (75), Expect = 2.5
Identities = 18/79 (22%), Positives = 40/79 (49%)
Frame = -2
Query: 318 CLEILLQSILKS*SILSTLLGFRIDFEENEVVPNMLNDSV*IVLFSCAIVMPGKKKLLVL 139
CL +LL + S +++ TLL R+ F EN V+ N D ++ +C+ + + ++
Sbjct: 143 CLMLLLWMLTTSHAMMHTLLAARLSFCENNVILNFFCDLFVLLKLACSDTYVNELMIFIM 202
Query: 138 VTIFFMGHVFTQIVRFSLI 82
++ + F ++ ++ I
Sbjct: 203 SSLLIVIPFFLIVMSYARI 221
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,826,513
Number of Sequences: 1393205
Number of extensions: 10818640
Number of successful extensions: 24645
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24626
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27576232529
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
