Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002376A_C01 KMC002376A_c01
(431 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H86301 hypothetical protein F19K19.4 [imported] - Arabidops... 73 9e-13
ref|NP_564003.1| receptor-like serine/threonine kinase, putative... 73 9e-13
gb|AAF06016.1|AF194171_1 putative serine/threonine kinase [Horde... 67 4e-11
emb|CAB55406.1| zwh22.1 [Oryza sativa (indica cultivar-group)] 56 9e-08
emb|CAB51836.1| Putitive Ser/Thr protein kinase [Oryza sativa (i... 56 1e-07
>pir||H86301 hypothetical protein F19K19.4 [imported] - Arabidopsis thaliana
gi|9989053|gb|AAG10816.1|AC011808_4 Unknown protein
[Arabidopsis thaliana]
Length = 396
Score = 72.8 bits (177), Expect = 9e-13
Identities = 41/103 (39%), Positives = 58/103 (55%), Gaps = 8/103 (7%)
Frame = -1
Query: 428 YEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQPNAKLRPRMSEVVEKLTVNVDMKDV 249
YE N L +VD L+ EEA ++LK+GLLC Q + KLRP MS VV LT D+
Sbjct: 270 YERNELVDLVDSGLNGVFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVRLLTGEKDIDYK 329
Query: 248 SISKPGFVADLRNIRIKQEVA--------MNSLSPSGTSFASS 144
IS+PG ++D +++++ VA N +PS +S SS
Sbjct: 330 KISRPGLISDFMDLKVRGPVATKTEQVNRQNYTNPSSSSNGSS 372
>ref|NP_564003.1| receptor-like serine/threonine kinase, putative; protein id:
At1g16670.1, supported by cDNA: gi_16649102 [Arabidopsis
thaliana] gi|16649103|gb|AAL24403.1| Unknown protein
[Arabidopsis thaliana] gi|23197888|gb|AAN15471.1|
Unknown protein [Arabidopsis thaliana]
Length = 390
Score = 72.8 bits (177), Expect = 9e-13
Identities = 41/103 (39%), Positives = 58/103 (55%), Gaps = 8/103 (7%)
Frame = -1
Query: 428 YEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQPNAKLRPRMSEVVEKLTVNVDMKDV 249
YE N L +VD L+ EEA ++LK+GLLC Q + KLRP MS VV LT D+
Sbjct: 264 YERNELVDLVDSGLNGVFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVRLLTGEKDIDYK 323
Query: 248 SISKPGFVADLRNIRIKQEVA--------MNSLSPSGTSFASS 144
IS+PG ++D +++++ VA N +PS +S SS
Sbjct: 324 KISRPGLISDFMDLKVRGPVATKTEQVNRQNYTNPSSSSNGSS 366
>gb|AAF06016.1|AF194171_1 putative serine/threonine kinase [Hordeum vulgare]
Length = 168
Score = 67.4 bits (163), Expect = 4e-11
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -1
Query: 428 YEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQPNAKLRPRMSEVVEKLTVNVDMKDV 249
YE +L ++D + + VE+A +FLK+GLLC Q + RP MS VV LT D++
Sbjct: 46 YEQGDLAKIIDSSVGDDLDVEQACRFLKIGLLCTQDVTRHRPTMSTVVSMLTGEKDVESE 105
Query: 248 SISKPGFVADLRNIRIKQEVAMNSLS-PSGTSFASSIWSMASSL 120
ISKP ++D +++I+ N+++ S ++ S+I + +S L
Sbjct: 106 KISKPATISDFMDLKIRSMRRENNIAFASSSTLLSTIMAHSSPL 149
>emb|CAB55406.1| zwh22.1 [Oryza sativa (indica cultivar-group)]
Length = 661
Score = 56.2 bits (134), Expect = 9e-08
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = -1
Query: 428 YEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQPNAKLRPRMSEVVEKLTVNVDMKDV 249
YE L ++D L + + V+EA +FLK+GLLC Q RP MS VV LT
Sbjct: 503 YEQERLAEIIDADLGNDLDVDEACRFLKIGLLCTQDAMARRPNMSTVVRMLTGEKHFSVH 562
Query: 248 SISKPGFVADLRNIRI-KQEVAMNSLSPSGTSFASSIWSMASS 123
I++P + D ++++ + N + + S ++MAS+
Sbjct: 563 RITRPAMITDFADLKVSSSQQKENETTRNEILARSCTYAMASA 605
>emb|CAB51836.1| Putitive Ser/Thr protein kinase [Oryza sativa (indica
cultivar-group)]
Length = 319
Score = 55.8 bits (133), Expect = 1e-07
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = -1
Query: 428 YEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQPNAKLRPRMSEVVEKLTVNVDMKDV 249
YE L ++D L + + V+EA +FLK+GLLC Q RP MS VV LT
Sbjct: 205 YEQERLAEIIDADLGNDLDVDEACRFLKIGLLCTQDAMARRPNMSTVVRMLTGEKHFSVH 264
Query: 248 SISKPGFVADLRNIRI 201
I++P + D ++++
Sbjct: 265 RITRPAMITDFADLKV 280
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 353,638,970
Number of Sequences: 1393205
Number of extensions: 6833176
Number of successful extensions: 18206
Number of sequences better than 10.0: 774
Number of HSP's better than 10.0 without gapping: 17692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18192
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 6789548448
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
