Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002362A_C01 KMC002362A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195118.1| putative protein; protein id: At4g33920.1, supp... 150 1e-35
gb|AAK63942.1|AC084282_23 putative protein phosphatase [Oryza sa... 134 1e-30
ref|NP_201409.1| protein phosphatase 2C-like protein; protein id... 119 2e-26
pir||T45768 protein phosphatase 2C-like protein - Arabidopsis th... 119 4e-26
ref|NP_566949.1| protein phosphatase 2C -like protein; protein i... 119 4e-26
>ref|NP_195118.1| putative protein; protein id: At4g33920.1, supported by cDNA:
40123., supported by cDNA: gi_13937197, supported by
cDNA: gi_19548014 [Arabidopsis thaliana]
gi|7485610|pir||T05220 hypothetical protein F17I5.110 -
Arabidopsis thaliana gi|3297816|emb|CAA19874.1| putative
protein [Arabidopsis thaliana]
gi|7270341|emb|CAB80109.1| putative protein [Arabidopsis
thaliana] gi|13937198|gb|AAK50092.1|AF372953_1
AT4g33920/F17I5_110 [Arabidopsis thaliana]
gi|19548015|gb|AAL87371.1| AT4g33920/F17I5_110
[Arabidopsis thaliana] gi|21593561|gb|AAM65528.1|
putative protein phosphatase [Arabidopsis thaliana]
Length = 380
Score = 150 bits (379), Expect = 1e-35
Identities = 80/112 (71%), Positives = 93/112 (82%), Gaps = 2/112 (1%)
Frame = -2
Query: 601 LIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKIDKGIR 422
LIFASDGLW+ LSDE AVE+V K+PR GIA+RLVRAAL+EAAKKREMRY DI KI KGIR
Sbjct: 265 LIFASDGLWEHLSDETAVEIVLKHPRTGIARRLVRAALEEAAKKREMRYGDIKKIAKGIR 324
Query: 421 RHFHDDITVIVIYLDHHE-GSSNGKF-KQTGVGYTTAPVDIFSLNADEAENR 272
RHFHDDI+VIV+YLD ++ SSN K KQ G+ TAP DI+SL++DEAE R
Sbjct: 325 RHFHDDISVIVVYLDQNKTSSSNSKLVKQGGI---TAPPDIYSLHSDEAEQR 373
>gb|AAK63942.1|AC084282_23 putative protein phosphatase [Oryza sativa (japonica
cultivar-group)]
Length = 380
Score = 134 bits (336), Expect = 1e-30
Identities = 62/107 (57%), Positives = 83/107 (76%)
Frame = -2
Query: 601 LIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKIDKGIR 422
LIFASDGLW+ LSD+AAV++VFK PR GIA RLV+AAL+EA +KRE+ + D+ I+KG+R
Sbjct: 262 LIFASDGLWEHLSDDAAVQIVFKNPRTGIANRLVKAALKEATRKREVSFRDLKTIEKGVR 321
Query: 421 RHFHDDITVIVIYLDHHEGSSNGKFKQTGVGYTTAPVDIFSLNADEA 281
RHFHDDI+VIV+YLD H G + + + T APVDI+S N+ ++
Sbjct: 322 RHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNSGQS 368
>ref|NP_201409.1| protein phosphatase 2C-like protein; protein id: At5g66080.1,
supported by cDNA: gi_17065021 [Arabidopsis thaliana]
gi|10177123|dbj|BAB10413.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
gi|17065022|gb|AAL32665.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
gi|24899803|gb|AAN65116.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
Length = 385
Score = 119 bits (299), Expect = 2e-26
Identities = 55/75 (73%), Positives = 70/75 (93%)
Frame = -2
Query: 601 LIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKIDKGIR 422
LIFASDGLW+QLS++ AVE+V +PR GIA+RLV+AALQEAAKKREMRY+D+ KI++G+R
Sbjct: 283 LIFASDGLWEQLSNQEAVEIVQNHPRNGIARRLVKAALQEAAKKREMRYSDLNKIERGVR 342
Query: 421 RHFHDDITVIVIYLD 377
RHFHDDITV+V++LD
Sbjct: 343 RHFHDDITVVVLFLD 357
>pir||T45768 protein phosphatase 2C-like protein - Arabidopsis thaliana
gi|6572058|emb|CAB63001.1| protein phosphatase 2C-like
protein [Arabidopsis thaliana]
Length = 379
Score = 119 bits (297), Expect = 4e-26
Identities = 54/81 (66%), Positives = 73/81 (89%)
Frame = -2
Query: 601 LIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKIDKGIR 422
LIFASDGLW+Q+S++ AV++V +PR GIA+RLV+ ALQEAAKKREMRY+D+ KI++G+R
Sbjct: 280 LIFASDGLWEQMSNQEAVDIVQNHPRNGIARRLVKMALQEAAKKREMRYSDLKKIERGVR 339
Query: 421 RHFHDDITVIVIYLDHHEGSS 359
RHFHDDITV++I+LD ++ SS
Sbjct: 340 RHFHDDITVVIIFLDTNQVSS 360
>ref|NP_566949.1| protein phosphatase 2C -like protein; protein id: At3g51370.1,
supported by cDNA: gi_15292742, supported by cDNA:
gi_20259654 [Arabidopsis thaliana]
Length = 294
Score = 119 bits (297), Expect = 4e-26
Identities = 54/81 (66%), Positives = 73/81 (89%)
Frame = -2
Query: 601 LIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKIDKGIR 422
LIFASDGLW+Q+S++ AV++V +PR GIA+RLV+ ALQEAAKKREMRY+D+ KI++G+R
Sbjct: 195 LIFASDGLWEQMSNQEAVDIVQNHPRNGIARRLVKMALQEAAKKREMRYSDLKKIERGVR 254
Query: 421 RHFHDDITVIVIYLDHHEGSS 359
RHFHDDITV++I+LD ++ SS
Sbjct: 255 RHFHDDITVVIIFLDTNQVSS 275
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,535,905
Number of Sequences: 1393205
Number of extensions: 9449057
Number of successful extensions: 27723
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 26589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27655
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
