Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002339A_C02 KMC002339A_c02
(640 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196530.1| putative protein; protein id: At5g09680.1 [Arab... 152 5e-36
dbj|BAB09523.1| gene_id:MTH16.10~unknown protein [Arabidopsis th... 152 5e-36
dbj|BAC55856.1| OSJNBa0086N05.30 [Oryza sativa (japonica cultiva... 138 5e-32
ref|XP_135010.2| NADPH cytochrome B5 oxidoreductase [Mus musculu... 91 1e-17
ref|NP_077157.1| NADPH cytochrome B5 oxidoreductase; cytochrome ... 91 1e-17
>ref|NP_196530.1| putative protein; protein id: At5g09680.1 [Arabidopsis thaliana]
gi|11357500|pir||T49930 hypothetical protein F17I14.130
- Arabidopsis thaliana gi|7671421|emb|CAB89362.1|
putative protein [Arabidopsis thaliana]
Length = 211
Score = 152 bits (383), Expect = 5e-36
Identities = 72/97 (74%), Positives = 80/97 (82%)
Frame = -1
Query: 640 HPDLAGLKGQSNRRLISKDDVKKHQTEGHMWTVLKGRVYNISPYMKFHPGGVDMLMKAVG 461
HPDLAGLKG+SN+RLI D+VKKH+T MWTVLKGRVYNISPYM FHPGGVDMLMKAVG
Sbjct: 114 HPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVG 173
Query: 460 KDCTSLFNKYHAWVNAEFLLEKCLVRHLR*RSMKKDQ 350
+D T LFNKYHAWVN + LLEKCLV L +KK +
Sbjct: 174 RDGTLLFNKYHAWVNVDILLEKCLVGVLDDTKVKKQE 210
>dbj|BAB09523.1| gene_id:MTH16.10~unknown protein [Arabidopsis thaliana]
Length = 275
Score = 152 bits (383), Expect = 5e-36
Identities = 72/97 (74%), Positives = 80/97 (82%)
Frame = -1
Query: 640 HPDLAGLKGQSNRRLISKDDVKKHQTEGHMWTVLKGRVYNISPYMKFHPGGVDMLMKAVG 461
HPDLAGLKG+SN+RLI D+VKKH+T MWTVLKGRVYNISPYM FHPGGVDMLMKAVG
Sbjct: 178 HPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVG 237
Query: 460 KDCTSLFNKYHAWVNAEFLLEKCLVRHLR*RSMKKDQ 350
+D T LFNKYHAWVN + LLEKCLV L +KK +
Sbjct: 238 RDGTLLFNKYHAWVNVDILLEKCLVGVLDDTKVKKQE 274
>dbj|BAC55856.1| OSJNBa0086N05.30 [Oryza sativa (japonica cultivar-group)]
Length = 216
Score = 138 bits (348), Expect = 5e-32
Identities = 69/88 (78%), Positives = 76/88 (85%)
Frame = -1
Query: 640 HPDLAGLKGQSNRRLISKDDVKKHQTEGHMWTVLKGRVYNISPYMKFHPGGVDMLMKAVG 461
HPDLA LKGQ NRRLIS ++VK+H+T +WTVLKGRVYNI+PYMKFHP GVDMLMKA G
Sbjct: 127 HPDLA-LKGQLNRRLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHP-GVDMLMKAAG 184
Query: 460 KDCTSLFNKYHAWVNAEFLLEKCLVRHL 377
KD T+LFNKYHAWVN EFLLEKCLV L
Sbjct: 185 KDSTALFNKYHAWVNFEFLLEKCLVGFL 212
>ref|XP_135010.2| NADPH cytochrome B5 oxidoreductase [Mus musculus]
gi|26354983|dbj|BAC41118.1| unnamed protein product [Mus
musculus]
Length = 494
Score = 91.3 bits (225), Expect = 1e-17
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = -1
Query: 634 DLAGLKGQSNRRLISKDDVKKHQTEGHMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKD 455
DL GLKG ++++++KKH + W ++G VYN+SPYM++HPGG D LM+A G D
Sbjct: 12 DLTGLKGGLIE--VTEEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGAD 69
Query: 454 CTSLFNKYHAWVNAEFLLEKCLV 386
T LFN+ H WVN E +L++CLV
Sbjct: 70 GTDLFNEVHRWVNYESMLKECLV 92
>ref|NP_077157.1| NADPH cytochrome B5 oxidoreductase; cytochrome b-type NAD(P)H
oxidoreductase [Mus musculus]
gi|12802901|gb|AAK08116.1|AF338818_1 flavohemoprotein
b5/b5R [Mus musculus]
Length = 494
Score = 91.3 bits (225), Expect = 1e-17
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = -1
Query: 634 DLAGLKGQSNRRLISKDDVKKHQTEGHMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKD 455
DL GLKG ++++++KKH + W ++G VYN+SPYM++HPGG D LM+A G D
Sbjct: 12 DLTGLKGGLIE--VTEEELKKHNKKEDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGAD 69
Query: 454 CTSLFNKYHAWVNAEFLLEKCLV 386
T LFN+ H WVN E +L++CLV
Sbjct: 70 GTDLFNEVHRWVNYESMLKECLV 92
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 551,015,686
Number of Sequences: 1393205
Number of extensions: 11974936
Number of successful extensions: 36491
Number of sequences better than 10.0: 398
Number of HSP's better than 10.0 without gapping: 35239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36474
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
