Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002334A_C01 KMC002334A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB03052.1| mitochondrial carrier protein-like [Arabidopsis ... 248 3e-65
ref|NP_566683.1| expressed protein; protein id: At3g21390.1, sup... 248 3e-65
ref|NP_199708.1| mitochondrial carrier protein-like; protein id:... 246 2e-64
dbj|BAB64182.1| putative mitochondrial carrier protein [Oryza sa... 232 2e-60
ref|NP_192019.1| mitochondrial carrier protein family; protein i... 99 2e-20
>dbj|BAB03052.1| mitochondrial carrier protein-like [Arabidopsis thaliana]
Length = 346
Score = 248 bits (633), Expect = 3e-65
Identities = 120/160 (75%), Positives = 139/160 (86%), Gaps = 4/160 (2%)
Frame = -3
Query: 529 TRGFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWN-HYRYSNTSAEN---SPSSF 362
TRG +G+YAGLSPTL+EIIPYAGLQFGTYDTFKRW+M +N YR S++S+ N S SSF
Sbjct: 187 TRGIKGLYAGLSPTLIEIIPYAGLQFGTYDTFKRWSMVYNKRYRSSSSSSTNPSDSLSSF 246
Query: 361 QLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRL 182
QLFLCGLA+GT +KLVCHPLDVVKKRFQ+EGLQRHP+YGARVE AY +MFD + +ILR
Sbjct: 247 QLFLCGLASGTVSKLVCHPLDVVKKRFQVEGLQRHPKYGARVELNAYKNMFDGLGQILRS 306
Query: 181 EGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESLVT 62
EGW GLYKGI+PST+KAAPAGAVTFVAYEL SDW E+ +T
Sbjct: 307 EGWHGLYKGIVPSTIKAAPAGAVTFVAYELASDWFEANLT 346
Score = 57.8 bits (138), Expect = 8e-08
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Frame = -3
Query: 523 GFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNTSAENSP--SSFQLFL 350
G G + G P L+ ++PY +QF K +A ++ AEN S + ++
Sbjct: 90 GLSGFWRGNVPALLMVVPYTSIQFAVLHKVKSFAA-------GSSKAENHAQLSPYLSYI 142
Query: 349 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLEGWA 170
G AG A + +P D+++ +G E + Y +M A I++ G
Sbjct: 143 SGALAGCAATVGSYPFDLLRTVLASQG-----------EPKVYPNMRSAFLSIVQTRGIK 191
Query: 169 GLYKGIIPSTVKAAPAGAVTFVAYELTSDW 80
GLY G+ P+ ++ P + F Y+ W
Sbjct: 192 GLYAGLSPTLIEIIPYAGLQFGTYDTFKRW 221
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = -3
Query: 346 GLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVE--RRAYSSMFDAIQRILRLEGW 173
G AG +++V PLDV+K RFQ++ L+ + + + Y+ +F + I R EG
Sbjct: 33 GGVAGAISRMVTSPLDVIKIRFQVQ-LEPTATWALKDSQLKPKYNGLFRTTKDIFREEGL 91
Query: 172 AGLYKGIIPSTVKAAPAGAVTF 107
+G ++G +P+ + P ++ F
Sbjct: 92 SGFWRGNVPALLMVVPYTSIQF 113
>ref|NP_566683.1| expressed protein; protein id: At3g21390.1, supported by cDNA:
39353., supported by cDNA: gi_19347717 [Arabidopsis
thaliana] gi|19347718|gb|AAL85968.1| unknown protein
[Arabidopsis thaliana] gi|21593478|gb|AAM65445.1|
mitochondrial carrier protein-like [Arabidopsis
thaliana] gi|21689713|gb|AAM67478.1| unknown protein
[Arabidopsis thaliana]
Length = 335
Score = 248 bits (633), Expect = 3e-65
Identities = 120/160 (75%), Positives = 139/160 (86%), Gaps = 4/160 (2%)
Frame = -3
Query: 529 TRGFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWN-HYRYSNTSAEN---SPSSF 362
TRG +G+YAGLSPTL+EIIPYAGLQFGTYDTFKRW+M +N YR S++S+ N S SSF
Sbjct: 176 TRGIKGLYAGLSPTLIEIIPYAGLQFGTYDTFKRWSMVYNKRYRSSSSSSTNPSDSLSSF 235
Query: 361 QLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRL 182
QLFLCGLA+GT +KLVCHPLDVVKKRFQ+EGLQRHP+YGARVE AY +MFD + +ILR
Sbjct: 236 QLFLCGLASGTVSKLVCHPLDVVKKRFQVEGLQRHPKYGARVELNAYKNMFDGLGQILRS 295
Query: 181 EGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESLVT 62
EGW GLYKGI+PST+KAAPAGAVTFVAYEL SDW E+ +T
Sbjct: 296 EGWHGLYKGIVPSTIKAAPAGAVTFVAYELASDWFEANLT 335
Score = 57.8 bits (138), Expect = 8e-08
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Frame = -3
Query: 523 GFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNTSAENSP--SSFQLFL 350
G G + G P L+ ++PY +QF K +A ++ AEN S + ++
Sbjct: 79 GLSGFWRGNVPALLMVVPYTSIQFAVLHKVKSFAA-------GSSKAENHAQLSPYLSYI 131
Query: 349 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLEGWA 170
G AG A + +P D+++ +G E + Y +M A I++ G
Sbjct: 132 SGALAGCAATVGSYPFDLLRTVLASQG-----------EPKVYPNMRSAFLSIVQTRGIK 180
Query: 169 GLYKGIIPSTVKAAPAGAVTFVAYELTSDW 80
GLY G+ P+ ++ P + F Y+ W
Sbjct: 181 GLYAGLSPTLIEIIPYAGLQFGTYDTFKRW 210
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = -3
Query: 346 GLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVE--RRAYSSMFDAIQRILRLEGW 173
G AG +++V PLDV+K RFQ++ L+ + + + Y+ +F + I R EG
Sbjct: 22 GGVAGAISRMVTSPLDVIKIRFQVQ-LEPTATWALKDSQLKPKYNGLFRTTKDIFREEGL 80
Query: 172 AGLYKGIIPSTVKAAPAGAVTF 107
+G ++G +P+ + P ++ F
Sbjct: 81 SGFWRGNVPALLMVVPYTSIQF 102
>ref|NP_199708.1| mitochondrial carrier protein-like; protein id: At5g48970.1
[Arabidopsis thaliana] gi|10177187|dbj|BAB10321.1|
mitochondrial carrier protein-like [Arabidopsis
thaliana] gi|26449838|dbj|BAC42042.1| putative
mitochondrial carrier protein [Arabidopsis thaliana]
Length = 339
Score = 246 bits (627), Expect = 2e-64
Identities = 116/157 (73%), Positives = 134/157 (84%), Gaps = 3/157 (1%)
Frame = -3
Query: 529 TRGFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNT---SAENSPSSFQ 359
+RG +G+Y GL+PTLVEI+PYAGLQFGTYD FKRW M WN Y+ S+ + + + SSFQ
Sbjct: 181 SRGIRGLYNGLTPTLVEIVPYAGLQFGTYDMFKRWMMDWNRYKLSSKIPINVDTNLSSFQ 240
Query: 358 LFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLE 179
LF+CGL AGT AKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAY +M D +++I+ E
Sbjct: 241 LFICGLGAGTSAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYRNMLDGLRQIMISE 300
Query: 178 GWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESL 68
GW GLYKGI+PSTVKAAPAGAVTFVAYE TSDWLES+
Sbjct: 301 GWHGLYKGIVPSTVKAAPAGAVTFVAYEFTSDWLESI 337
Score = 62.4 bits (150), Expect = 3e-09
Identities = 39/149 (26%), Positives = 65/149 (43%)
Frame = -3
Query: 523 GFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNTSAENSPSSFQLFLCG 344
GF+G + G P L+ ++PY +QF K +A + T S + F+ G
Sbjct: 84 GFRGFWRGNVPALLMVMPYTSIQFTVLHKLKSFASG-----STKTEDHIHLSPYLSFVSG 138
Query: 343 LAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLEGWAGL 164
AG A L +P D+++ +G E + Y +M A I++ G GL
Sbjct: 139 ALAGCAATLGSYPFDLLRTILASQG-----------EPKVYPTMRSAFVDIIQSRGIRGL 187
Query: 163 YKGIIPSTVKAAPAGAVTFVAYELTSDWL 77
Y G+ P+ V+ P + F Y++ W+
Sbjct: 188 YNGLTPTLVEIVPYAGLQFGTYDMFKRWM 216
Score = 44.7 bits (104), Expect = 7e-04
Identities = 31/95 (32%), Positives = 49/95 (50%), Gaps = 8/95 (8%)
Frame = -3
Query: 346 GLAAGTCAKLVCHPLDVVKKRFQIE-------GLQRHPRYGARVERRAYSSMFDAIQRIL 188
G +G ++ V PLDV+K RFQ++ GL R GA Y+ M A + I
Sbjct: 25 GAISGGVSRSVTSPLDVIKIRFQVQLEPTTSWGLVRGNLSGA----SKYTGMVQATKDIF 80
Query: 187 RLEGWAGLYKGIIPSTVKAAPAGAVTF-VAYELTS 86
R EG+ G ++G +P+ + P ++ F V ++L S
Sbjct: 81 REEGFRGFWRGNVPALLMVMPYTSIQFTVLHKLKS 115
>dbj|BAB64182.1| putative mitochondrial carrier protein [Oryza sativa (japonica
cultivar-group)] gi|21104659|dbj|BAB93250.1| putative
mitochondrial carrier protein [Oryza sativa (japonica
cultivar-group)]
Length = 334
Score = 232 bits (592), Expect = 2e-60
Identities = 111/158 (70%), Positives = 130/158 (82%), Gaps = 3/158 (1%)
Frame = -3
Query: 529 TRGFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNT---SAENSPSSFQ 359
TRGF+G+YAGL+PTLVEIIPYAGLQFG+YDTFKR M WN YRYS+ S ++S SSFQ
Sbjct: 176 TRGFRGLYAGLTPTLVEIIPYAGLQFGSYDTFKRSMMTWNRYRYSHLNSGSEDDSVSSFQ 235
Query: 358 LFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLE 179
LFLCG AAGT +K CHPLDVVKKRFQIEGL+RHPRYGAR+E Y M+ A++ I+ E
Sbjct: 236 LFLCGFAAGTFSKAACHPLDVVKKRFQIEGLKRHPRYGARIESSTYKGMYHALKEIVAKE 295
Query: 178 GWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESLV 65
G+ GLYKG+ PS VK+APAGAVTFVAYE SDWLES++
Sbjct: 296 GFGGLYKGLFPSLVKSAPAGAVTFVAYEYISDWLESIL 333
Score = 53.9 bits (128), Expect = 1e-06
Identities = 36/143 (25%), Positives = 60/143 (41%)
Frame = -3
Query: 523 GFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNTSAENSPSSFQLFLCG 344
G G + G P L+ +PY +QF K +A S T S + ++ G
Sbjct: 79 GLPGFWRGNVPALLMYMPYTAIQFTVLHKLKTFASG-----SSKTEDHLHLSPYLSYVSG 133
Query: 343 LAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLEGWAGL 164
AG A + +P D+++ +G E + Y M A I++ G+ GL
Sbjct: 134 AIAGCAATVGSYPFDLLRTILASQG-----------EPKVYPDMRSAFLDIMKTRGFRGL 182
Query: 163 YKGIIPSTVKAAPAGAVTFVAYE 95
Y G+ P+ V+ P + F +Y+
Sbjct: 183 YAGLTPTLVEIIPYAGLQFGSYD 205
Score = 47.0 bits (110), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (49%), Gaps = 7/89 (7%)
Frame = -3
Query: 352 LCGLAAGTCAKLVCHPLDVVKKRFQIE-------GLQRHPRYGARVERRAYSSMFDAIQR 194
L G +G ++ V PLDV+K RFQ++ G+ R YG Y+ + A +
Sbjct: 18 LAGAISGGISRTVTSPLDVIKIRFQVQLEPTTSWGVLRRDVYGP----SKYTGLLQASKD 73
Query: 193 ILRLEGWAGLYKGIIPSTVKAAPAGAVTF 107
ILR EG G ++G +P+ + P A+ F
Sbjct: 74 ILREEGLPGFWRGNVPALLMYMPYTAIQF 102
>ref|NP_192019.1| mitochondrial carrier protein family; protein id: At4g01100.1,
supported by cDNA: gi_13430511, supported by cDNA:
gi_15724289, supported by cDNA: gi_15810608 [Arabidopsis
thaliana] gi|7441719|pir||T01729 mitochondrial solute
carrier protein homolog - Arabidopsis thaliana
gi|2191150|gb|AAB61037.1| similar to mitochondrial
carrier family [Arabidopsis thaliana]
gi|7267607|emb|CAB80919.1| putative carrier protein
[Arabidopsis thaliana]
gi|13430512|gb|AAK25878.1|AF360168_1 putative carrier
protein [Arabidopsis thaliana]
gi|15724290|gb|AAL06538.1|AF412085_1 AT4g01100/F2N1_16
[Arabidopsis thaliana] gi|15810609|gb|AAL07192.1|
putative carrier protein [Arabidopsis thaliana]
Length = 352
Score = 99.4 bits (246), Expect = 2e-20
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Frame = -3
Query: 523 GFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNTSAENSPSSFQLFLCG 344
G + +Y G P+++ ++PY GL F Y++ K W + N Y N + CG
Sbjct: 195 GPRALYRGWLPSVIGVVPYVGLNFSVYESLKDWLVKENPY---GLVENNELTVVTRLTCG 251
Query: 343 LAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRY----GARVERRAYSSMFDAIQRILRLEG 176
AGT + + +PLDV+++R Q+ G + G Y+ M DA ++ +R EG
Sbjct: 252 AIAGTVGQTIAYPLDVIRRRMQMVGWKDASAIVTGEGRSTASLEYTGMVDAFRKTVRHEG 311
Query: 175 WAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWL 77
+ LYKG++P++VK P+ A+ FV YE+ D L
Sbjct: 312 FGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVL 344
Score = 60.8 bits (146), Expect = 9e-09
Identities = 38/151 (25%), Positives = 65/151 (42%)
Frame = -3
Query: 529 TRGFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHYRYSNTSAENSPSSFQLFL 350
T G +G++ G I+P + ++F +Y+ + R N +A+ +P
Sbjct: 89 TEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASNGILYMYRQRTGNENAQLTP--LLRLG 146
Query: 349 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLEGWA 170
G AG A +P+D+V+ R ++ +Y + A+ +LR EG
Sbjct: 147 AGATAGIIAMSATYPMDMVRGRLTVQTANSPYQY---------RGIAHALATVLREEGPR 197
Query: 169 GLYKGIIPSTVKAAPAGAVTFVAYELTSDWL 77
LY+G +PS + P + F YE DWL
Sbjct: 198 ALYRGWLPSVIGVVPYVGLNFSVYESLKDWL 228
Score = 35.8 bits (81), Expect = 0.32
Identities = 27/92 (29%), Positives = 39/92 (42%)
Frame = -3
Query: 358 LFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYSSMFDAIQRILRLE 179
LF G+A G V PL+ +K Q++ YS ++ I R E
Sbjct: 42 LFAGGVAGGVSRTAVA-PLERMKILLQVQN----------PHNIKYSGTVQGLKHIWRTE 90
Query: 178 GWAGLYKGIIPSTVKAAPAGAVTFVAYELTSD 83
G GL+KG + + P AV F +YE S+
Sbjct: 91 GLRGLFKGNGTNCARIVPNSAVKFFSYEQASN 122
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,714,402
Number of Sequences: 1393205
Number of extensions: 10665231
Number of successful extensions: 32486
Number of sequences better than 10.0: 882
Number of HSP's better than 10.0 without gapping: 28330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31245
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
