Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002333A_C01 KMC002333A_c01
(674 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO16600.1| digalactosyldiacylglycerol synthase [Xerophyta hu... 113 2e-24
emb|CAD40929.1| OSJNBa0033G16.8 [Oryza sativa (japonica cultivar... 105 7e-22
ref|NP_187773.1| digalactosyldiacylglycerol synthase; protein id... 100 3e-20
gb|EAA12462.1| ebiP6819 [Anopheles gambiae str. PEST] 40 0.029
ref|NP_609284.1| CG4450-PA [Drosophila melanogaster] gi|22946023... 38 0.14
>gb|AAO16600.1| digalactosyldiacylglycerol synthase [Xerophyta humilis]
Length = 465
Score = 113 bits (283), Expect = 2e-24
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = -3
Query: 648 VAHSLSMPNLSEIVDGGLAFAHYCLTGNEFLRLCTGAIPGTRNYDKQHSQDLHLWPPQVE 469
+ S+SMP+LSE+VDGGLAFAHYCLTGNE LRL TGAIPGTR+YD H +DLHL PPQV+
Sbjct: 400 IKKSVSMPSLSEVVDGGLAFAHYCLTGNEVLRLATGAIPGTRDYDMPHCKDLHLLPPQVQ 459
Query: 468 NPIYGW 451
+P+YGW
Sbjct: 460 HPVYGW 465
>emb|CAD40929.1| OSJNBa0033G16.8 [Oryza sativa (japonica cultivar-group)]
Length = 775
Score = 105 bits (261), Expect = 7e-22
Identities = 45/60 (75%), Positives = 53/60 (88%)
Frame = -3
Query: 630 MPNLSEIVDGGLAFAHYCLTGNEFLRLCTGAIPGTRNYDKQHSQDLHLWPPQVENPIYGW 451
+P LSE+VDGGLAFAH+CLTGNE LRL TGAIPGTR+YDKQ DL+L PPQV++P+YGW
Sbjct: 716 LPRLSEVVDGGLAFAHHCLTGNEILRLATGAIPGTRDYDKQQCMDLNLLPPQVQHPVYGW 775
>ref|NP_187773.1| digalactosyldiacylglycerol synthase; protein id: At3g11670.1,
supported by cDNA: gi_18700088, supported by cDNA:
gi_20855997, supported by cDNA: gi_5354157 [Arabidopsis
thaliana] gi|5354158|gb|AAD42378.1|AF149841_1
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana] gi|5354160|gb|AAD42379.1|AF149842_1
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana] gi|6041825|gb|AAF02140.1|AC009918_12
digalactosyldiacylglycerol synthase [Arabidopsis
thaliana] gi|18700089|gb|AAL77656.1| AT3g11670/T19F11_7
[Arabidopsis thaliana] gi|20855998|gb|AAM26642.1|
AT3g11670/T19F11_7 [Arabidopsis thaliana]
Length = 808
Score = 99.8 bits (247), Expect = 3e-20
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = -3
Query: 663 DNGKLVAHSLSMPNLSEIVDGGLAFAHYCLTGNEFLRLCTGAIPGTRNYDKQHSQDLHLW 484
+ G+ + S S+P+ +E+VDGGLAF+HY LTGN+FLRLCTGA P T++YD QH +DL+L
Sbjct: 738 EGGRKMRKSRSVPSFNEVVDGGLAFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLV 797
Query: 483 PPQVENPIYGW 451
PP V PI+GW
Sbjct: 798 PPHVHKPIFGW 808
>gb|EAA12462.1| ebiP6819 [Anopheles gambiae str. PEST]
Length = 437
Score = 40.0 bits (92), Expect = 0.029
Identities = 24/81 (29%), Positives = 41/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 263 LTKLSPFL--LVF*FSYYQNTLSFILPHLIVGS*MASILISYLDWLYDXPGYQTKKVGLV 90
LT+ SP L L+ F L+ ++ L++G + + L+ Y + L D P Q K + L
Sbjct: 275 LTRHSPGLRILIHTFKASARELTLLVFFLVLGIVVFASLVYYAEKLQDNPDNQFKSIPLG 334
Query: 89 IWFAVQTQCFIGFSDFGRNYY 27
+W+A+ T +G+ D Y
Sbjct: 335 LWWAIVTMTTVGYGDMAPKTY 355
>ref|NP_609284.1| CG4450-PA [Drosophila melanogaster] gi|22946023|gb|AAF52768.2|
CG4450-PA [Drosophila melanogaster]
Length = 705
Score = 37.7 bits (86), Expect = 0.14
Identities = 24/81 (29%), Positives = 39/81 (47%), Gaps = 2/81 (2%)
Frame = -1
Query: 263 LTKLSPFL--LVF*FSYYQNTLSFILPHLIVGS*MASILISYLDWLYDXPGYQTKKVGLV 90
LT+ SP L L+ F L+ ++ L++G + L Y + L D P Q K + L
Sbjct: 390 LTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQFKSIPLG 449
Query: 89 IWFAVQTQCFIGFSDFGRNYY 27
+W+A+ T +G+ D Y
Sbjct: 450 LWWAIVTMTTVGYGDVAPKTY 470
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 586,872,416
Number of Sequences: 1393205
Number of extensions: 12746545
Number of successful extensions: 24397
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24395
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29704274460
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
