Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002332A_C01 KMC002332A_c01
(524 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_665914.1| porcupine homolog; porcupine-A; porcupine-B; po... 31 7.7
ref|NP_076127.1| porcupine homolog; porcupine-A; porcupine-B; po... 31 7.7
ref|NP_665915.1| porcupine homolog; porcupine-A; porcupine-B; po... 31 7.7
ref|NP_058609.1| porcupine homolog; porcupine-A; porcupine-B; po... 31 7.7
>ref|NP_665914.1| porcupine homolog; porcupine-A; porcupine-B; porcupine-C;
porcupine-D [Mus musculus] gi|6714510|dbj|BAA89469.1|
porcupine-C [Mus musculus] gi|21595488|gb|AAH32284.1|
porcupine homolog (Drosophila) [Mus musculus]
Length = 455
Score = 31.2 bits (69), Expect = 7.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -3
Query: 414 FFEVLVEFCLMEKINGSKVCRVWLLRKEGIEIRV------NSYLCHSSIANEGDIYLIFF 253
FF+ L++ CL+ + + ++WLL R+ SYL H+S G L F
Sbjct: 9 FFQQLLQGCLLPTVQQG-LDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSLYHF 67
Query: 252 FRFVLSWILIL 220
F+ + W+++L
Sbjct: 68 FQLHMVWVVLL 78
>ref|NP_076127.1| porcupine homolog; porcupine-A; porcupine-B; porcupine-C;
porcupine-D [Mus musculus] gi|6714512|dbj|BAA89470.1|
porcupine-D [Mus musculus]
Length = 461
Score = 31.2 bits (69), Expect = 7.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -3
Query: 414 FFEVLVEFCLMEKINGSKVCRVWLLRKEGIEIRV------NSYLCHSSIANEGDIYLIFF 253
FF+ L++ CL+ + + ++WLL R+ SYL H+S G L F
Sbjct: 9 FFQQLLQGCLLPTVQQG-LDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSLYHF 67
Query: 252 FRFVLSWILIL 220
F+ + W+++L
Sbjct: 68 FQLHMVWVVLL 78
>ref|NP_665915.1| porcupine homolog; porcupine-A; porcupine-B; porcupine-C;
porcupine-D [Mus musculus] gi|6714506|dbj|BAA89467.1|
porcupine-B [Mus musculus]
Length = 456
Score = 31.2 bits (69), Expect = 7.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -3
Query: 414 FFEVLVEFCLMEKINGSKVCRVWLLRKEGIEIRV------NSYLCHSSIANEGDIYLIFF 253
FF+ L++ CL+ + + ++WLL R+ SYL H+S G L F
Sbjct: 9 FFQQLLQGCLLPTVQQG-LDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSLYHF 67
Query: 252 FRFVLSWILIL 220
F+ + W+++L
Sbjct: 68 FQLHMVWVVLL 78
>ref|NP_058609.1| porcupine homolog; porcupine-A; porcupine-B; porcupine-C;
porcupine-D [Mus musculus] gi|6714508|dbj|BAA89468.1|
porcupine-A [Mus musculus]
Length = 450
Score = 31.2 bits (69), Expect = 7.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -3
Query: 414 FFEVLVEFCLMEKINGSKVCRVWLLRKEGIEIRV------NSYLCHSSIANEGDIYLIFF 253
FF+ L++ CL+ + + ++WLL R+ SYL H+S G L F
Sbjct: 9 FFQQLLQGCLLPTVQQG-LDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSLYHF 67
Query: 252 FRFVLSWILIL 220
F+ + W+++L
Sbjct: 68 FQLHMVWVVLL 78
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,850,132
Number of Sequences: 1393205
Number of extensions: 9193210
Number of successful extensions: 19689
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19686
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
