Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002325A_C01 KMC002325A_c01
(659 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198831.1| peroxidase, putative; protein id: At5g40150.1 [... 110 8e-31
emb|CAA72487.1| peroxidase ATP26a [Arabidopsis thaliana] 110 8e-31
ref|NP_189460.1| peroxidase, putative; protein id: At3g28200.1, ... 105 3e-29
gb|AAK59478.1| putative peroxidase [Arabidopsis thaliana] 105 3e-29
gb|AAM65654.1| peroxidase [Arabidopsis thaliana] 86 2e-19
>ref|NP_198831.1| peroxidase, putative; protein id: At5g40150.1 [Arabidopsis
thaliana] gi|26397798|sp|Q9FL16|PE63_ARATH Peroxidase 63
precursor (Atperox P63) (ATP26a)
gi|10177502|dbj|BAB10896.1| peroxidase ATP26a homolog
[Arabidopsis thaliana] gi|26452285|dbj|BAC43229.1|
putative peroxidase ATP26a [Arabidopsis thaliana]
Length = 328
Score = 110 bits (276), Expect(2) = 8e-31
Identities = 50/75 (66%), Positives = 62/75 (82%)
Frame = -3
Query: 657 LQKACANYQTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDQGLFSDAVTKPFVAKF 478
L+KAC+N + +PT+SVFND+MTPNKFDN+YFQN+PKGLGLL+SD GLFSD T+PFV +
Sbjct: 230 LKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELY 289
Query: 477 AADQNEFFRVFTRAM 433
A DQ+ FF F AM
Sbjct: 290 ARDQSRFFNDFAGAM 304
Score = 45.1 bits (105), Expect(2) = 8e-31
Identities = 21/27 (77%), Positives = 22/27 (80%)
Frame = -1
Query: 440 GQCQKLSLLGVKTGRRGEIRRRCDQVN 360
G QKLSL GV TGRRGEIRRRCD +N
Sbjct: 302 GAMQKLSLHGVLTGRRGEIRRRCDAIN 328
>emb|CAA72487.1| peroxidase ATP26a [Arabidopsis thaliana]
Length = 276
Score = 110 bits (276), Expect(2) = 8e-31
Identities = 50/75 (66%), Positives = 62/75 (82%)
Frame = -3
Query: 657 LQKACANYQTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDQGLFSDAVTKPFVAKF 478
L+KAC+N + +PT+SVFND+MTPNKFDN+YFQN+PKGLGLL+SD GLFSD T+PFV +
Sbjct: 178 LKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELY 237
Query: 477 AADQNEFFRVFTRAM 433
A DQ+ FF F AM
Sbjct: 238 ARDQSRFFNDFAGAM 252
Score = 45.1 bits (105), Expect(2) = 8e-31
Identities = 21/27 (77%), Positives = 22/27 (80%)
Frame = -1
Query: 440 GQCQKLSLLGVKTGRRGEIRRRCDQVN 360
G QKLSL GV TGRRGEIRRRCD +N
Sbjct: 250 GAMQKLSLHGVLTGRRGEIRRRCDAIN 276
>ref|NP_189460.1| peroxidase, putative; protein id: At3g28200.1, supported by cDNA:
gi_14334599 [Arabidopsis thaliana]
gi|25453208|sp|Q9LHA7|PE31_ARATH Peroxidase 31 precursor
(Atperox P31) (ATP41) gi|11994582|dbj|BAB02637.1|
peroxidase [Arabidopsis thaliana]
gi|23297263|gb|AAN12927.1| putative peroxidase
[Arabidopsis thaliana]
Length = 316
Score = 105 bits (261), Expect(2) = 3e-29
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = -3
Query: 657 LQKACANYQTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDQGLFSDAVTKPFVAKF 478
L+KACANY +PT+SVFNDIMTPNKFDN+Y+QNL KGLGLL+SD GL+SD T+ FV +
Sbjct: 218 LKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLY 277
Query: 477 AADQNEFFRVFTRAM 433
A +Q+ FF+ F +AM
Sbjct: 278 AKNQDLFFKDFAKAM 292
Score = 45.4 bits (106), Expect(2) = 3e-29
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -1
Query: 431 QKLSLLGVKTGRRGEIRRRCDQVN 360
QKLSL G++TGRRGEIRRRCD +N
Sbjct: 293 QKLSLFGIQTGRRGEIRRRCDAIN 316
>gb|AAK59478.1| putative peroxidase [Arabidopsis thaliana]
Length = 316
Score = 105 bits (261), Expect(2) = 3e-29
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = -3
Query: 657 LQKACANYQTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDQGLFSDAVTKPFVAKF 478
L+KACANY +PT+SVFNDIMTPNKFDN+Y+QNL KGLGLL+SD GL+SD T+ FV +
Sbjct: 218 LKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLY 277
Query: 477 AADQNEFFRVFTRAM 433
A +Q+ FF+ F +AM
Sbjct: 278 AKNQDLFFKDFAKAM 292
Score = 45.4 bits (106), Expect(2) = 3e-29
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -1
Query: 431 QKLSLLGVKTGRRGEIRRRCDQVN 360
QKLSL G++TGRRGEIRRRCD +N
Sbjct: 293 QKLSLFGIQTGRRGEIRRRCDAIN 316
>gb|AAM65654.1| peroxidase [Arabidopsis thaliana]
Length = 334
Score = 85.5 bits (210), Expect(2) = 2e-19
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = -3
Query: 657 LQKACANYQTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDQGLFSDAVTKPFVAKF 478
L+ C N+ + T++ FND+MTP KFDN+YF+NL +GLGLL SD L D TKPFV +
Sbjct: 232 LKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLY 291
Query: 477 AADQNEFFRVFTRAMPEAQSI 415
A ++ FF F RAM + ++
Sbjct: 292 ATNETAFFEDFARAMEKLGTV 312
Score = 32.3 bits (72), Expect(2) = 2e-19
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 431 QKLSLLGVKTGRRGEIRRRCDQVN 360
+KL +GVK + GE+RRRCD N
Sbjct: 307 EKLGTVGVKGDKDGEVRRRCDHFN 330
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 525,375,390
Number of Sequences: 1393205
Number of extensions: 11112919
Number of successful extensions: 37776
Number of sequences better than 10.0: 444
Number of HSP's better than 10.0 without gapping: 30203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35972
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28289785200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
