Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002322A_C01 KMC002322A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL75737.1|AC091724_10 Putative aldose 1-epimerase - like pro... 189 2e-47
ref|NP_566594.1| aldose 1-epimerase, putative; protein id: At3g1... 186 2e-46
dbj|BAB02717.1| aldose 1-epimerase-like protein [Arabidopsis tha... 186 2e-46
ref|NP_795937.1| RIKEN cDNA A530057M15 gene [Mus musculus] gi|20... 116 2e-25
ref|NP_190364.1| aldose 1-epimerase - like protein; protein id: ... 116 2e-25
>gb|AAL75737.1|AC091724_10 Putative aldose 1-epimerase - like protein [Oryza sativa]
gi|21306610|gb|AAM46059.1|AC122145_13 Putative aldose
1-epimerase - like protein [Oryza sativa (japonica
cultivar-group)]
Length = 343
Score = 189 bits (480), Expect = 2e-47
Identities = 85/115 (73%), Positives = 102/115 (87%)
Frame = -1
Query: 541 QKRIGDTISQVGMGYDHNYVLDSGEEKEGLRHAAKVKEPSSSRVLNLWTNVPGMQFYTAN 362
+ +IG I+ V GYDHNYVLDSGEEK GL+HAAK+K+ S+SR L+LWT+ PGMQFYTAN
Sbjct: 228 EHKIGARINDVPGGYDHNYVLDSGEEKNGLKHAAKLKDSSNSRTLDLWTDAPGMQFYTAN 287
Query: 361 YVDGVAGKAGAVYGKHAGLCLETQGFPNAINQPDFPSIVVRPGEKYQHSMSYEFS 197
YVDGV GK GAVYGKH+G+CLETQGFPNAINQP+FPS+VV+PGEKY+H+M +EFS
Sbjct: 288 YVDGVTGKGGAVYGKHSGVCLETQGFPNAINQPNFPSVVVQPGEKYKHTMLFEFS 342
>ref|NP_566594.1| aldose 1-epimerase, putative; protein id: At3g17940.1, supported by
cDNA: gi_14532615 [Arabidopsis thaliana]
gi|14532616|gb|AAK64036.1| putative aldose 1-epimerase
[Arabidopsis thaliana] gi|25054834|gb|AAN71907.1|
putative aldose 1-epimerase [Arabidopsis thaliana]
Length = 323
Score = 186 bits (471), Expect = 2e-46
Identities = 85/116 (73%), Positives = 102/116 (87%), Gaps = 1/116 (0%)
Frame = -1
Query: 541 QKRIGDTISQVGMGYDHNYVLDS-GEEKEGLRHAAKVKEPSSSRVLNLWTNVPGMQFYTA 365
+KRIG++I +VG+GYDHNYVLD +EKEGL+HAAK+ + +SSRVLNLWTNVPGMQFYT
Sbjct: 207 EKRIGESIGEVGIGYDHNYVLDCPDQEKEGLKHAAKLSDAASSRVLNLWTNVPGMQFYTG 266
Query: 364 NYVDGVAGKAGAVYGKHAGLCLETQGFPNAINQPDFPSIVVRPGEKYQHSMSYEFS 197
NYV+GV GK AVYGKHAG+CLETQGFPNAINQ +FPS+VV+ GEKY H+M +EFS
Sbjct: 267 NYVNGVVGKGNAVYGKHAGVCLETQGFPNAINQSNFPSVVVKAGEKYNHTMLFEFS 322
>dbj|BAB02717.1| aldose 1-epimerase-like protein [Arabidopsis thaliana]
Length = 341
Score = 186 bits (471), Expect = 2e-46
Identities = 85/116 (73%), Positives = 102/116 (87%), Gaps = 1/116 (0%)
Frame = -1
Query: 541 QKRIGDTISQVGMGYDHNYVLDS-GEEKEGLRHAAKVKEPSSSRVLNLWTNVPGMQFYTA 365
+KRIG++I +VG+GYDHNYVLD +EKEGL+HAAK+ + +SSRVLNLWTNVPGMQFYT
Sbjct: 225 EKRIGESIGEVGIGYDHNYVLDCPDQEKEGLKHAAKLSDAASSRVLNLWTNVPGMQFYTG 284
Query: 364 NYVDGVAGKAGAVYGKHAGLCLETQGFPNAINQPDFPSIVVRPGEKYQHSMSYEFS 197
NYV+GV GK AVYGKHAG+CLETQGFPNAINQ +FPS+VV+ GEKY H+M +EFS
Sbjct: 285 NYVNGVVGKGNAVYGKHAGVCLETQGFPNAINQSNFPSVVVKAGEKYNHTMLFEFS 340
>ref|NP_795937.1| RIKEN cDNA A530057M15 gene [Mus musculus]
gi|20381129|gb|AAH28818.1| Similar to hypothetical
protein BC014916 [Mus musculus]
gi|26334117|dbj|BAC30776.1| unnamed protein product [Mus
musculus]
Length = 342
Score = 116 bits (291), Expect = 2e-25
Identities = 52/104 (50%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Frame = -1
Query: 502 GYDHNYVLDSGEEKEGLRHAAKVKEPSSSRVLNLWTNVPGMQFYTANYVDG-VAGKAGAV 326
G+DHN+ L +EK + A+V+ +S R+L ++T PG+QFYT N++DG + GK GAV
Sbjct: 241 GFDHNFCLKESKEK---KFCARVRHAASGRILEVYTTQPGVQFYTGNFLDGTLKGKNGAV 297
Query: 325 YGKHAGLCLETQGFPNAINQPDFPSIVVRPGEKYQHSMSYEFSV 194
Y KH+GLCLETQ +P+++NQP FP ++RPGE+Y H+ ++FSV
Sbjct: 298 YPKHSGLCLETQNWPDSVNQPQFPPALLRPGEEYNHTTWFKFSV 341
>ref|NP_190364.1| aldose 1-epimerase - like protein; protein id: At3g47800.1,
supported by cDNA: 119313., supported by cDNA:
gi_17381241 [Arabidopsis thaliana]
gi|7445540|pir||T07719 aldose 1-epimerase homolog
T23J7.130 - Arabidopsis thaliana
gi|4741197|emb|CAB41863.1| aldose 1-epimerase-like
protein [Arabidopsis thaliana]
gi|17381242|gb|AAL36040.1| AT3g47800/T23J7_130
[Arabidopsis thaliana] gi|28416453|gb|AAO42757.1|
At3g47800/T23J7_130 [Arabidopsis thaliana]
Length = 358
Score = 116 bits (290), Expect = 2e-25
Identities = 57/114 (50%), Positives = 75/114 (65%)
Frame = -1
Query: 538 KRIGDTISQVGMGYDHNYVLDSGEEKEGLRHAAKVKEPSSSRVLNLWTNVPGMQFYTANY 359
+ IG I ++ GYD NYV+D G + LR A V E + R + LWTN PG+QFYT+N
Sbjct: 244 REIGSRIHELPGGYDINYVID-GPIGKHLRKTAVVTEQVTGRKMELWTNQPGVQFYTSNM 302
Query: 358 VDGVAGKAGAVYGKHAGLCLETQGFPNAINQPDFPSIVVRPGEKYQHSMSYEFS 197
+ V GK AVY K+ GLCLETQGFP+++N +FPS +V PGE Y H M + F+
Sbjct: 303 MKRVVGKGKAVYEKYGGLCLETQGFPDSVNHKNFPSQIVNPGESYLHVMLFRFT 356
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,729,845
Number of Sequences: 1393205
Number of extensions: 10960849
Number of successful extensions: 33052
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 31844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32887
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
