Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002301A_C01 KMC002301A_c01
(455 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173353.1| hypothetical protein; protein id: At1g19190.1 [... 65 1e-17
gb|AAO42119.1| unknown protein [Arabidopsis thaliana] 65 1e-17
dbj|BAB39937.1| P0493G01.19 [Oryza sativa (japonica cultivar-gro... 57 2e-17
ref|NP_178453.1| putative esterase; protein id: At2g03550.1 [Ara... 58 8e-17
gb|AAO41964.1| putative esterase [Arabidopsis thaliana] 58 8e-17
>ref|NP_173353.1| hypothetical protein; protein id: At1g19190.1 [Arabidopsis
thaliana] gi|25518494|pir||D86325 hypothetical protein
T29M8.6 - Arabidopsis thaliana
gi|8954057|gb|AAF82230.1|AC069143_6 Contains similarity
to a PrMC3 from Pinus radiata gb|AF110333. [Arabidopsis
thaliana]
Length = 318
Score = 64.7 bits (156), Expect(2) = 1e-17
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = -2
Query: 406 ERLWRLASPTTG-GLDDPLFNPVMDPNMGRVPCKRVLVCVAENDFLKDRGWYYKESLEKS 230
ERLWR+ASP +G G++DP N V+ ++ + C+RVLV VA ND L GW Y LEKS
Sbjct: 216 ERLWRIASPDSGNGVEDPWIN-VVGSDLTGLGCRRVLVMVAGNDVLARGGWSYVAELEKS 274
Query: 229 GWHG 218
GW G
Sbjct: 275 GWIG 278
Score = 45.4 bits (106), Expect(2) = 1e-17
Identities = 21/39 (53%), Positives = 25/39 (63%)
Frame = -3
Query: 228 GGTGSVEVMEAKGEGHVFHLFNPSCENAVSLLNRFVSFI 112
G G V+VME K EGHVFHL +P ENA +L F F+
Sbjct: 275 GWIGKVKVMETKEEGHVFHLRDPDSENARRVLRNFAEFL 313
>gb|AAO42119.1| unknown protein [Arabidopsis thaliana]
Length = 195
Score = 64.7 bits (156), Expect(2) = 1e-17
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = -2
Query: 406 ERLWRLASPTTG-GLDDPLFNPVMDPNMGRVPCKRVLVCVAENDFLKDRGWYYKESLEKS 230
ERLWR+ASP +G G++DP N V+ ++ + C+RVLV VA ND L GW Y LEKS
Sbjct: 93 ERLWRIASPDSGNGVEDPWIN-VVGSDLTGLGCRRVLVMVAGNDVLARGGWSYVAELEKS 151
Query: 229 GWHG 218
GW G
Sbjct: 152 GWIG 155
Score = 45.4 bits (106), Expect(2) = 1e-17
Identities = 21/39 (53%), Positives = 25/39 (63%)
Frame = -3
Query: 228 GGTGSVEVMEAKGEGHVFHLFNPSCENAVSLLNRFVSFI 112
G G V+VME K EGHVFHL +P ENA +L F F+
Sbjct: 152 GWIGKVKVMETKEEGHVFHLRDPDSENARRVLRNFAEFL 190
>dbj|BAB39937.1| P0493G01.19 [Oryza sativa (japonica cultivar-group)]
Length = 137
Score = 57.0 bits (136), Expect(2) = 2e-17
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -2
Query: 454 QRIGSEAEKPQHAVLVERLWRLASPTTGGLDDPLFNPVMD--PNMGRVPCKRVLVCVAEN 281
+ IG E P+ + LW A P T G+DDP NP++ P +G++ C RV+VC A
Sbjct: 17 EAIGEEYPDPEGCAMGTGLWMYACPCTTGMDDPRMNPMVPGAPALGQMACDRVMVCAAVG 76
Query: 280 DFLKDRGWYY 251
DFL+ R Y
Sbjct: 77 DFLRWRAHAY 86
Score = 52.8 bits (125), Expect(2) = 2e-17
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -3
Query: 225 GTGSVEVMEAKGEGHVFHLFNPSCENAVSLLNRFVSFIN 109
G SVEV+E GEGHVFHLF+P A LLNR V+F+N
Sbjct: 95 GDASVEVLETAGEGHVFHLFDPDGGKAKELLNRMVAFVN 133
>ref|NP_178453.1| putative esterase; protein id: At2g03550.1 [Arabidopsis thaliana]
gi|25320334|pir||G84449 probable esterase [imported] -
Arabidopsis thaliana gi|4335745|gb|AAD17422.1| putative
esterase [Arabidopsis thaliana]
Length = 312
Score = 57.8 bits (138), Expect(2) = 8e-17
Identities = 32/65 (49%), Positives = 39/65 (59%), Gaps = 1/65 (1%)
Frame = -2
Query: 409 VERLWRLASPTTG-GLDDPLFNPVMDPNMGRVPCKRVLVCVAENDFLKDRGWYYKESLEK 233
VE WR+ASP + G+DDP N V G + C RVLV VA +D +GW Y E L+K
Sbjct: 212 VEGSWRVASPNSKQGVDDPWLNVVGSDPSG-LGCGRVLVMVAGDDLFVRQGWCYAEKLKK 270
Query: 232 SGWHG 218
SGW G
Sbjct: 271 SGWEG 275
Score = 49.7 bits (117), Expect(2) = 8e-17
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = -3
Query: 237 RRVGGTGSVEVMEAKGEGHVFHLFNPSCENAVSLLNRFVSFIN 109
++ G G VEVME K EGHVFHL NP+ +NA ++ + FIN
Sbjct: 269 KKSGWEGEVEVMETKNEGHVFHLKNPNSDNARQVVKKLEEFIN 311
>gb|AAO41964.1| putative esterase [Arabidopsis thaliana]
Length = 308
Score = 57.8 bits (138), Expect(2) = 8e-17
Identities = 32/65 (49%), Positives = 39/65 (59%), Gaps = 1/65 (1%)
Frame = -2
Query: 409 VERLWRLASPTTG-GLDDPLFNPVMDPNMGRVPCKRVLVCVAENDFLKDRGWYYKESLEK 233
VE WR+ASP + G+DDP N V G + C RVLV VA +D +GW Y E L+K
Sbjct: 208 VEGSWRVASPNSKQGVDDPWLNVVGSDPSG-LGCGRVLVMVAGDDLFVRQGWCYAEKLKK 266
Query: 232 SGWHG 218
SGW G
Sbjct: 267 SGWEG 271
Score = 49.7 bits (117), Expect(2) = 8e-17
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = -3
Query: 237 RRVGGTGSVEVMEAKGEGHVFHLFNPSCENAVSLLNRFVSFIN 109
++ G G VEVME K EGHVFHL NP+ +NA ++ + FIN
Sbjct: 265 KKSGWEGEVEVMETKNEGHVFHLKNPNSDNARQVVKKLEEFIN 307
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 424,047,926
Number of Sequences: 1393205
Number of extensions: 9537833
Number of successful extensions: 27144
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 25872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27068
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11413361193
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
