Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002290A_C01 KMC002290A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 gi|100013|pir||A30311... 208 5e-53
pir||T07670 probable protein kinase PK1 - potato gi|1200256|emb|... 192 3e-48
ref|NP_189395.1| serine/threonine-protein kinase, PK7; protein i... 182 4e-45
ref|NP_194391.1| putative protein kinase; protein id: At4g26610.... 180 1e-44
pir||A45510 probable protein kinase - maize (fragment) gi|168618... 179 2e-44
>sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 gi|100013|pir||A30311 protein kinase C (EC
2.7.1.-) homolog - kidney bean gi|169361|gb|AAA33772.1|
PVPK-1 protein
Length = 609
Score = 208 bits (529), Expect = 5e-53
Identities = 101/117 (86%), Positives = 107/117 (91%)
Frame = -2
Query: 589 FLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR 410
FLYELLFGRTPFKGSANRATLFNV+GQPLRFPESP+VSFAARDLIRGLLVKEPQHRLAYR
Sbjct: 494 FLYELLFGRTPFKGSANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYR 553
Query: 409 RGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKAVAAERVAPGVKPAGNYLDIDFF 239
RGATEIKQHPFF NVNWALIRCA+PPEVPRQ + E+ GVKP+GNYLDIDFF
Sbjct: 554 RGATEIKQHPFFQNVNWALIRCATPPEVPRQVINLPQTEKDL-GVKPSGNYLDIDFF 609
>pir||T07670 probable protein kinase PK1 - potato gi|1200256|emb|CAA62476.1|
stpk1 protein kinase [Solanum tuberosum]
Length = 631
Score = 192 bits (488), Expect = 3e-48
Identities = 93/124 (75%), Positives = 102/124 (82%), Gaps = 7/124 (5%)
Frame = -2
Query: 589 FLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR 410
FLYELLFG+TPFKG+ NRATLFNVVGQPL+FPE+PSVSFAARDLIRGLLVKEPQHRLAYR
Sbjct: 508 FLYELLFGQTPFKGAGNRATLFNVVGQPLKFPETPSVSFAARDLIRGLLVKEPQHRLAYR 567
Query: 409 RGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKAVAAERVAPG-------VKPAGNYLD 251
RGATEIKQHPFF NVNWALIRC SPP+VP+ + R P VKP+GNY +
Sbjct: 568 RGATEIKQHPFFQNVNWALIRCTSPPDVPKPSSMTYNMPRTPPAGKTPGVDVKPSGNYFE 627
Query: 250 IDFF 239
IDFF
Sbjct: 628 IDFF 631
>ref|NP_189395.1| serine/threonine-protein kinase, PK7; protein id: At3g27580.1
[Arabidopsis thaliana] gi|729905|sp|Q05999|KPK7_ARATH
Putative serine/threonine-protein kinase PK7
gi|320562|pir||JC1385 protein kinase (EC 2.7.1.37) -
Arabidopsis thaliana gi|303500|dbj|BAA01716.1|
serine/threonine protein kinase [Arabidopsis thaliana]
gi|11994185|dbj|BAB01288.1| serine/threonine-protein
kinase [Arabidopsis thaliana]
Length = 578
Score = 182 bits (461), Expect = 4e-45
Identities = 92/134 (68%), Positives = 100/134 (73%), Gaps = 17/134 (12%)
Frame = -2
Query: 589 FLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR 410
FLYELLFG TPF+G NRATLFNVVGQPLRFPE P+VSFAARDLIRGLLVKEPQHRLAYR
Sbjct: 445 FLYELLFGITPFRGGDNRATLFNVVGQPLRFPEHPNVSFAARDLIRGLLVKEPQHRLAYR 504
Query: 409 RGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKAVAAERVAPG---------------- 278
RGATEIKQHPFF +VNWALIRC SPP++P+ A V G
Sbjct: 505 RGATEIKQHPFFQSVNWALIRCTSPPQIPQPVKPMDQAHSVRHGFSQGHGHVGYDKPPTV 564
Query: 277 -VKPAGNYLDIDFF 239
VKP+GNYL+IDFF
Sbjct: 565 DVKPSGNYLEIDFF 578
>ref|NP_194391.1| putative protein kinase; protein id: At4g26610.1, supported by
cDNA: gi_17380933, supported by cDNA: gi_20258942
[Arabidopsis thaliana] gi|7488161|pir||T08927 probable
protein kinase T15N24.60 (EC 2.7.1.-) - Arabidopsis
thaliana gi|4938499|emb|CAB43857.1| putative protein
kinase [Arabidopsis thaliana] gi|7269513|emb|CAB79516.1|
putative protein kinase [Arabidopsis thaliana]
gi|17380934|gb|AAL36279.1| putative protein kinase
[Arabidopsis thaliana] gi|20258943|gb|AAM14187.1|
putative protein kinase [Arabidopsis thaliana]
Length = 506
Score = 180 bits (456), Expect = 1e-44
Identities = 89/122 (72%), Positives = 99/122 (80%), Gaps = 5/122 (4%)
Frame = -2
Query: 589 FLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR 410
FLYELLFG+TPFKGS NRATLFNVVGQPLRFPESP VSFAARDLIR LLVKEPQHRLAY+
Sbjct: 385 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRSLLVKEPQHRLAYK 444
Query: 409 RGATEIKQHPFFHNVNWALIRCASPPEVPR----QAMKAVAAERVAPGVK-PAGNYLDID 245
RGATE+KQHPFF VNWAL+RCASPPE+P+ ++ A A + VK NYL+ D
Sbjct: 445 RGATEMKQHPFFEGVNWALVRCASPPEIPKPVDYESAPATPAAATSTSVKSDQSNYLEFD 504
Query: 244 FF 239
FF
Sbjct: 505 FF 506
>pir||A45510 probable protein kinase - maize (fragment) gi|168618|gb|AAA33509.1|
protein kinase
Length = 416
Score = 179 bits (454), Expect = 2e-44
Identities = 84/121 (69%), Positives = 100/121 (82%), Gaps = 4/121 (3%)
Frame = -2
Query: 589 FLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYR 410
FLYELLFG+TPFKGS NRATLFNVVGQPLRFPESP VSFAARDLIRGLL+KEPQHRLAY+
Sbjct: 296 FLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYK 355
Query: 409 RGATEIKQHPFFHNVNWALIRCASPPEVPRQA----MKAVAAERVAPGVKPAGNYLDIDF 242
RGATEIKQHPFF VNWALIRCA+PP++P+ A ++++ + +YL+++F
Sbjct: 356 RGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEKGSDYLELEF 415
Query: 241 F 239
F
Sbjct: 416 F 416
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 503,194,645
Number of Sequences: 1393205
Number of extensions: 10803425
Number of successful extensions: 36024
Number of sequences better than 10.0: 1306
Number of HSP's better than 10.0 without gapping: 33938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35378
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
