Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002288A_C02 KMC002288A_c02
(652 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06355 hypothetical protein - tomato gi|643469|gb|AAA61967.... 96 4e-19
ref|NP_566513.1| expressed protein; protein id: At3g15450.1, sup... 92 5e-18
gb|AAG00940.1| unknown [Glycine max] 92 5e-18
ref|NP_567775.1| putative protein; protein id: At4g27450.1, supp... 91 2e-17
pir||T08937 hypothetical protein F27G19.50 - Arabidopsis thalian... 91 2e-17
>pir||T06355 hypothetical protein - tomato gi|643469|gb|AAA61967.1| unknown
Length = 295
Score = 95.9 bits (237), Expect = 4e-19
Identities = 42/62 (67%), Positives = 49/62 (78%)
Frame = -1
Query: 475 AGCLFHSEHGLLSFQHPTKKMKAMPRIDSEGIMCGANFNVDSQSKNQMMPRVGSEANWAI 296
+GC++HSE GL S++HP+ KMKAMPR+DSEG MCGA F VD SK MPRVGS ANWA
Sbjct: 233 SGCMYHSETGLKSYEHPSYKMKAMPRVDSEGSMCGAYFKVDVYSKVNSMPRVGSSANWAT 292
Query: 295 WG 290
WG
Sbjct: 293 WG 294
>ref|NP_566513.1| expressed protein; protein id: At3g15450.1, supported by cDNA:
gi_14335087 [Arabidopsis thaliana]
gi|7021730|gb|AAF35411.1| unknown protein [Arabidopsis
thaliana] gi|14335088|gb|AAK59823.1| AT3g15450/MJK13_11
[Arabidopsis thaliana] gi|15795110|dbj|BAB02374.1|
gene_id:MJK13.11~unknown protein [Arabidopsis thaliana]
gi|23308201|gb|AAN18070.1| At3g15450/MJK13_11
[Arabidopsis thaliana]
Length = 253
Score = 92.4 bits (228), Expect = 5e-18
Identities = 42/62 (67%), Positives = 49/62 (78%)
Frame = -1
Query: 472 GCLFHSEHGLLSFQHPTKKMKAMPRIDSEGIMCGANFNVDSQSKNQMMPRVGSEANWAIW 293
GC+FHSE GL SF HPT MKAMPRIDSEG++CGA+F VD+ SK +PR GSEANWA+
Sbjct: 191 GCMFHSETGLKSFDHPTNMMKAMPRIDSEGVLCGASFKVDACSKINSIPRRGSEANWALA 250
Query: 292 GS 287
S
Sbjct: 251 NS 252
>gb|AAG00940.1| unknown [Glycine max]
Length = 256
Score = 92.4 bits (228), Expect = 5e-18
Identities = 38/60 (63%), Positives = 48/60 (79%)
Frame = -1
Query: 472 GCLFHSEHGLLSFQHPTKKMKAMPRIDSEGIMCGANFNVDSQSKNQMMPRVGSEANWAIW 293
GC+FHSE GL+SF+HP K+KAMPR+DSEG MCGANF VD ++ +PRVGS++NW W
Sbjct: 194 GCMFHSEGGLMSFEHPMNKLKAMPRVDSEGAMCGANFKVDKFARVNSIPRVGSQSNWMEW 253
>ref|NP_567775.1| putative protein; protein id: At4g27450.1, supported by cDNA:
35207., supported by cDNA: gi_14030722, supported by
cDNA: gi_15028056, supported by cDNA: gi_20259058
[Arabidopsis thaliana]
gi|14030723|gb|AAK53036.1|AF375452_1 AT4g27450/F27G19_50
[Arabidopsis thaliana] gi|15028057|gb|AAK76559.1|
unknown protein [Arabidopsis thaliana]
gi|20259059|gb|AAM14245.1| unknown protein [Arabidopsis
thaliana] gi|21593019|gb|AAM64968.1| unknown
[Arabidopsis thaliana]
Length = 250
Score = 90.5 bits (223), Expect = 2e-17
Identities = 37/59 (62%), Positives = 49/59 (82%)
Frame = -1
Query: 472 GCLFHSEHGLLSFQHPTKKMKAMPRIDSEGIMCGANFNVDSQSKNQMMPRVGSEANWAI 296
GC+FHSE GL+SF+HP K+KAMPR+DSEG++CGANF VD ++ +PR GSEANW++
Sbjct: 192 GCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKVDVYNRVNSIPRRGSEANWSL 250
>pir||T08937 hypothetical protein F27G19.50 - Arabidopsis thaliana
gi|4972070|emb|CAB43877.1| putative protein [Arabidopsis
thaliana] gi|7269599|emb|CAB81395.1| putative protein
[Arabidopsis thaliana]
Length = 266
Score = 90.5 bits (223), Expect = 2e-17
Identities = 37/59 (62%), Positives = 49/59 (82%)
Frame = -1
Query: 472 GCLFHSEHGLLSFQHPTKKMKAMPRIDSEGIMCGANFNVDSQSKNQMMPRVGSEANWAI 296
GC+FHSE GL+SF+HP K+KAMPR+DSEG++CGANF VD ++ +PR GSEANW++
Sbjct: 208 GCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKVDVYNRVNSIPRRGSEANWSL 266
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 516,641,137
Number of Sequences: 1393205
Number of extensions: 10345238
Number of successful extensions: 19668
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19660
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
