Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002269A_C01 KMC002269A_c01
(345 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08813 transcription factor STGA1 - soybean gi|986969|gb|AA... 40 0.006
gb|AAK84888.1|AF402607_1 TGA-type basic leucine zipper protein T... 40 0.006
emb|CAC40022.1| bZIP transcription factor [Arabidopsis thaliana] 32 2.7
dbj|BAB90561.1| putative basic leucine zipper protein [Oryza sat... 32 2.7
ref|NP_565162.1| bZIP transcription factor, bZIP50; protein id: ... 31 3.5
>pir||T08813 transcription factor STGA1 - soybean gi|986969|gb|AAA75414.1|
TGACG-motif-binding protein
Length = 362
Score = 40.4 bits (93), Expect = 0.006
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -2
Query: 344 QRLRALSSLWSNRPREPA 291
QRLRALSSLWSNRPREPA
Sbjct: 345 QRLRALSSLWSNRPREPA 362
>gb|AAK84888.1|AF402607_1 TGA-type basic leucine zipper protein TGA1.1 [Phaseolus vulgaris]
Length = 362
Score = 40.4 bits (93), Expect = 0.006
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -2
Query: 344 QRLRALSSLWSNRPREPA 291
QRLRALSSLWSNRPREPA
Sbjct: 345 QRLRALSSLWSNRPREPA 362
>emb|CAC40022.1| bZIP transcription factor [Arabidopsis thaliana]
Length = 481
Score = 31.6 bits (70), Expect = 2.7
Identities = 16/31 (51%), Positives = 20/31 (63%)
Frame = -2
Query: 341 RLRALSSLWSNRPREPA*SHKITRTKTCDYE 249
RLRALSSLW +RPRE S + + T D +
Sbjct: 439 RLRALSSLWLSRPRETLMSDETSCQTTTDLQ 469
>dbj|BAB90561.1| putative basic leucine zipper protein [Oryza sativa (japonica
cultivar-group)] gi|20521238|dbj|BAB91754.1| putative
basic leucine zipper protein [Oryza sativa (japonica
cultivar-group)]
Length = 534
Score = 31.6 bits (70), Expect = 2.7
Identities = 13/16 (81%), Positives = 16/16 (99%)
Frame = -2
Query: 344 QRLRALSSLWSNRPRE 297
+RLRALS+LWS+RPRE
Sbjct: 489 RRLRALSNLWSSRPRE 504
>ref|NP_565162.1| bZIP transcription factor, bZIP50; protein id: At1g77920.1,
supported by cDNA: gi_16209662 [Arabidopsis thaliana]
gi|16209663|gb|AAL14391.1| At1g77920/F28K19_13
[Arabidopsis thaliana]
Length = 368
Score = 31.2 bits (69), Expect = 3.5
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -2
Query: 341 RLRALSSLWSNRPREP 294
RLRALSSLW+ RP+EP
Sbjct: 352 RLRALSSLWAARPQEP 367
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,761,209
Number of Sequences: 1393205
Number of extensions: 4859780
Number of successful extensions: 9372
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9366
length of database: 448,689,247
effective HSP length: 90
effective length of database: 323,300,797
effective search space used: 7759219128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
