KMC002248A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC002248A_C01 KMC002248A_c01
ccaaactGTAATTTCAAATTGACTGTTTTCAAAAGTTCATTTATGTTTACAGATTATAAC
TATATAATAAACGGATATGAGTCACATTAACATTTGCACACCCATCACAGAAAGTATCCA
AAGAAAACGCCACCTTAGAAACATCATGGTGTTCCCAGCAGCAGCCAGGCCAGCCATGAT
TCAAAACGGGCAAGCAAGCATCTCAGTCACTTTCCTCCCTTCCTCAAATGTCATAGAGCA
AATCCTTAAACACCTTCATATGCTCAGGCTGCAGAGCTATCGCGACGGATAAGCTCCCAT
CACCTGTTGAGCTTGGAATGATGAAAGACAGCCCCTCGTACGCAATCCCACCAGGTCCCA
TGAATATAGGCCTTCCCCAACCAAAGTCAGCATCATGAATTGGAAGCCTAGCCCAGCTAG
TGATACCGAGATTCGGACACCTGAAAGTATGTGCTCCGCGAACCAGCGCTTTAAGATCAG
GCTGCAGCTCTAGATAGTCTAGGGCAGATCTCAGATACTCGTTATTCATCCGCGA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002248A_C01 KMC002248A_c01
         (535 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD47830.1| hydroxycinnamoyl transferase [Nicotiana tabacum]      188  3e-47
ref|NP_199704.1| anthranilate N-benzoyltransferase; protein id: ...   178  3e-44
gb|AAM61215.1| anthranilate N-benzoyltransferase [Arabidopsis th...   178  3e-44
emb|CAD41497.1| OSJNBa0029H02.13 [Oryza sativa (japonica cultiva...   178  4e-44
emb|CAC09504.1| putative N-hydroxycinnamoyl/benzoyl transferase ...   178  4e-44

>emb|CAD47830.1| hydroxycinnamoyl transferase [Nicotiana tabacum]
          Length = 435

 Score =  188 bits (478), Expect = 3e-47
 Identities = 87/102 (85%), Positives = 96/102 (93%)
 Frame = -1

Query: 535 SRMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMG 356
           +RM+N+YLRSALDYLELQPDLKALVRGAHTF+CPNLGITSW+RLPIHDADFGWGRPIFMG
Sbjct: 333 ARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWSRLPIHDADFGWGRPIFMG 392

Query: 355 PGGIAYEGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYD 230
           PGGIAYEGLSFI+PS T DGS SVAI+LQ EHMK+F+  LYD
Sbjct: 393 PGGIAYEGLSFILPSPTNDGSQSVAISLQAEHMKLFEKFLYD 434

>ref|NP_199704.1| anthranilate N-benzoyltransferase; protein id: At5g48930.1,
           supported by cDNA: 114130. [Arabidopsis thaliana]
           gi|10177182|dbj|BAB10316.1| anthranilate
           N-benzoyltransferase [Arabidopsis thaliana]
          Length = 433

 Score =  178 bits (452), Expect = 3e-44
 Identities = 81/102 (79%), Positives = 93/102 (90%)
 Frame = -1

Query: 532 RMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGP 353
           RM++ YLRSALDYLE+QPDL ALVRGAHT++CPNLGITSW RLPI+DADFGWGRPIFMGP
Sbjct: 332 RMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGP 391

Query: 352 GGIAYEGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYDI 227
           GGI YEGLSF++PS T DGSLSVAIALQ EHMK+F+  L++I
Sbjct: 392 GGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFEI 433

>gb|AAM61215.1| anthranilate N-benzoyltransferase [Arabidopsis thaliana]
          Length = 433

 Score =  178 bits (452), Expect = 3e-44
 Identities = 81/102 (79%), Positives = 93/102 (90%)
 Frame = -1

Query: 532 RMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGP 353
           RM++ YLRSALDYLE+QPDL ALVRGAHT++CPNLGITSW RLPI+DADFGWGRPIFMGP
Sbjct: 332 RMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGP 391

Query: 352 GGIAYEGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYDI 227
           GGI YEGLSF++PS T DGSLSVAIALQ EHMK+F+  L++I
Sbjct: 392 GGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFEI 433

>emb|CAD41497.1| OSJNBa0029H02.13 [Oryza sativa (japonica cultivar-group)]
          Length = 442

 Score =  178 bits (451), Expect = 4e-44
 Identities = 78/102 (76%), Positives = 93/102 (90%)
 Frame = -1

Query: 532 RMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGP 353
           RMN+ Y RSALDYLELQPDL ALVRGAHTFRCPNLG+TSW RLPIHDADFGWGRP+FMGP
Sbjct: 341 RMNDSYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGP 400

Query: 352 GGIAYEGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYDI 227
           GGIAYEGL+F++PS+  DGSLS+AI+LQ EHM+ F+ L++++
Sbjct: 401 GGIAYEGLAFVLPSANKDGSLSIAISLQAEHMEKFRKLIFEV 442

>emb|CAC09504.1| putative N-hydroxycinnamoyl/benzoyl transferase [Oryza sativa
           (indica cultivar-group)]
          Length = 293

 Score =  178 bits (451), Expect = 4e-44
 Identities = 78/102 (76%), Positives = 93/102 (90%)
 Frame = -1

Query: 532 RMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGP 353
           RMN+ Y RSALDYLELQPDL ALVRGAHTFRCPNLG+TSW RLPIHDADFGWGRP+FMGP
Sbjct: 192 RMNDSYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGP 251

Query: 352 GGIAYEGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYDI 227
           GGIAYEGL+F++PS+  DGSLS+AI+LQ EHM+ F+ L++++
Sbjct: 252 GGIAYEGLAFVLPSANKDGSLSIAISLQAEHMEKFRKLIFEV 293

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,100,269
Number of Sequences: 1393205
Number of extensions: 10302554
Number of successful extensions: 30893
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 29335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30746
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MWM151e04_f AV767089 1 484
2 GENf048e03 BP060380 8 364
3 MR055d05_f BP080235 15 536
4 MF034b07_f BP030074 24 499




Lotus japonicus
Kazusa DNA Research Institute