Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002229A_C01 KMC002229A_c01
(505 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB53493.1| CAA303720.1 protein [Oryza sativa] 106 1e-22
ref|NP_176984.1| MtN21-like protein; protein id: At1g68170.1 [Ar... 103 8e-22
ref|NP_201275.1| nodulin-like protein; protein id: At5g64700.1 [... 82 3e-15
pir||D86382 hypothetical protein F4F7.12 [imported] - Arabidopsi... 75 4e-13
ref|NP_173898.1| MtN21 nodulin protein, putative; protein id: At... 75 4e-13
>emb|CAB53493.1| CAA303720.1 protein [Oryza sativa]
Length = 376
Score = 106 bits (265), Expect = 1e-22
Identities = 54/129 (41%), Positives = 83/129 (63%), Gaps = 4/129 (3%)
Frame = -2
Query: 504 KAKIVGTITGIGGAMVLTVVKGKEIKIESFHVNLLHPXNGTHPHAGG-TGEN---LLGAL 337
+AK+ GT+ G+GGAM+LT+ KG E+ H++L+ HP A TG N ++G++
Sbjct: 101 QAKVAGTLLGVGGAMLLTLYKGAELNPWHTHLDLVAALEARHPAAAAATGNNDRVIMGSM 160
Query: 336 CSLASGTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERDWSQWRLGWN 157
+ S Y++WLI+Q K++ Y HYTSTALM + S FAL ++R+ ++WRLG +
Sbjct: 161 LVVGSCVFYAVWLILQAKLSREYPFHYTSTALMCVMSGAQSAAFALLVDREPARWRLGLD 220
Query: 156 IRLLTVAYA 130
IRLL+V Y+
Sbjct: 221 IRLLSVVYS 229
>ref|NP_176984.1| MtN21-like protein; protein id: At1g68170.1 [Arabidopsis thaliana]
gi|25404706|pir||A96705 MtN21-like protein, 91922-89607
[imported] - Arabidopsis thaliana
gi|12325325|gb|AAG52606.1|AC016447_15 MtN21-like
protein; 91922-89607 [Arabidopsis thaliana]
Length = 329
Score = 103 bits (258), Expect = 8e-22
Identities = 51/128 (39%), Positives = 79/128 (60%)
Frame = -2
Query: 501 AKIVGTITGIGGAMVLTVVKGKEIKIESFHVNLLHPXNGTHPHAGGTGENLLGALCSLAS 322
AK+ GT+ G+GGA+V +G EI++ S HVNL++ + A ++LGAL
Sbjct: 101 AKVFGTLFGVGGALVFIFYRGIEIRLWSTHVNLVNQPRDSSRDATTHHISILGALLVFGG 160
Query: 321 GTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERDWSQWRLGWNIRLLT 142
S SLW ++Q K+++++ G Y + LM+ V++ + AL E D +WRLGWNIRLLT
Sbjct: 161 NISISLWFLLQVKISKQFGGPYWNATLMNMMGGVVAMLVALCWEHDLDEWRLGWNIRLLT 220
Query: 141 VAYAVYML 118
+AYA ++
Sbjct: 221 IAYAAILI 228
>ref|NP_201275.1| nodulin-like protein; protein id: At5g64700.1 [Arabidopsis
thaliana] gi|10177201|dbj|BAB10303.1| nodulin-like
protein [Arabidopsis thaliana]
Length = 359
Score = 82.4 bits (202), Expect = 3e-15
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = -2
Query: 501 AKIVGTITGIGGAMVLTVVKGKEIKIE---SFHVNLLHPXNGTHPH-AGGTGENLLGALC 334
AK+VG +GG ++L + KG +K+ F+ HP H +GG+ L G +
Sbjct: 133 AKLVGITVCMGGVIILAIYKGPLLKLPLCPHFYHGQEHPHRNNPGHVSGGSTSWLKGCVL 192
Query: 333 SLASGTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERDWSQWRLGWNI 154
+ S + LWL++Q ++ + Y T L +S+ SFV A+ +ERD S W+LGWN+
Sbjct: 193 MITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERDISAWKLGWNL 252
Query: 153 RLLTVAYAVYML 118
RL+ V Y +++
Sbjct: 253 RLVAVIYCGFIV 264
>pir||D86382 hypothetical protein F4F7.12 [imported] - Arabidopsis thaliana
Length = 356
Score = 75.1 bits (183), Expect = 4e-13
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Frame = -2
Query: 504 KAKIVGTITGIGGAMVLTVVKGKEIKIESFHVNLLHPXNGTHPHAGGTGEN--LLGALCS 331
+AK+VGT+ G GA+V KG EI I S HV+LL G+H T + +LG L
Sbjct: 127 RAKLVGTLLGACGALVFVFYKGIEIHIWSTHVDLL---KGSHTGRATTNHHVSILGVLMV 183
Query: 330 LASGTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERDWSQWRLGWNIR 151
L S K+ + G Y +T+LM+ S++ + AL + DW QW+LGW+I
Sbjct: 184 LGSNA----------KIGKELGGLYWNTSLMNGVGSLVCVIIALCSDHDWEQWQLGWDIN 233
Query: 150 LLTVAYA 130
LL Y+
Sbjct: 234 LLATLYS 240
>ref|NP_173898.1| MtN21 nodulin protein, putative; protein id: At1g25270.1
[Arabidopsis thaliana]
gi|11761475|gb|AAG40088.1|AC079374_4 MtN21 nodulin
protein, putative [Arabidopsis thaliana]
Length = 345
Score = 75.1 bits (183), Expect = 4e-13
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Frame = -2
Query: 504 KAKIVGTITGIGGAMVLTVVKGKEIKIESFHVNLLHPXNGTHPHAGGTGEN--LLGALCS 331
+AK+VGT+ G GA+V KG EI I S HV+LL G+H T + +LG L
Sbjct: 127 RAKLVGTLLGACGALVFVFYKGIEIHIWSTHVDLL---KGSHTGRATTNHHVSILGVLMV 183
Query: 330 LASGTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIERDWSQWRLGWNIR 151
L S K+ + G Y +T+LM+ S++ + AL + DW QW+LGW+I
Sbjct: 184 LGSNA----------KIGKELGGLYWNTSLMNGVGSLVCVIIALCSDHDWEQWQLGWDIN 233
Query: 150 LLTVAYA 130
LL Y+
Sbjct: 234 LLATLYS 240
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,307,469
Number of Sequences: 1393205
Number of extensions: 10095222
Number of successful extensions: 26597
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 25743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26518
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
