Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002222A_C01 KMC002222A_c01
(382 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA07232.1| putative Pi starvation-induced protein [Cicer ar... 67 7e-11
ref|NP_565029.1| expressed protein; protein id: At1g71950.1, sup... 66 9e-11
gb|AAM65234.1| unknown [Arabidopsis thaliana] 66 9e-11
pir||T03677 pit2 protein (clone pAL141), Pi starvation induced -... 62 2e-09
gb|AAO41126.1| putative Pi starvation induced protein [Oryza sat... 49 2e-05
>emb|CAA07232.1| putative Pi starvation-induced protein [Cicer arietinum]
Length = 129
Score = 66.6 bits (161), Expect = 7e-11
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -3
Query: 371 SYPIRTLSAVLGSEEAAKEAVVYDFEDEINDNFSAVITPENAVQLLKQPGVLHIIPSR 198
+Y IRTL+AVLGSEEAAKEA++Y ++ + FSA +TP+ Q+ KQPGVL ++PS+
Sbjct: 61 TYHIRTLTAVLGSEEAAKEALLYSYKSAAS-GFSAKLTPDQVAQISKQPGVLQVVPSQ 117
>ref|NP_565029.1| expressed protein; protein id: At1g71950.1, supported by cDNA:
37751. [Arabidopsis thaliana] gi|25406130|pir||D96742
unknown protein F17M19.10 [imported] - Arabidopsis
thaliana gi|12324543|gb|AAG52229.1|AC021665_12 unknown
protein; 53911-52791 [Arabidopsis thaliana]
gi|28466823|gb|AAO44020.1| At1g71950 [Arabidopsis
thaliana]
Length = 136
Score = 66.2 bits (160), Expect = 9e-11
Identities = 31/66 (46%), Positives = 48/66 (71%)
Frame = -3
Query: 371 SYPIRTLSAVLGSEEAAKEAVVYDFEDEINDNFSAVITPENAVQLLKQPGVLHIIPSRGC 192
+Y +RTLS+ LGSEEAAK+A++Y ++ E FSA +TPE ++ KQPGV+ ++PS+
Sbjct: 64 TYHLRTLSSALGSEEAAKDALIYSYK-EAASGFSAKLTPEQVAEISKQPGVIQVVPSQTY 122
Query: 191 KIMKLG 174
++ K G
Sbjct: 123 QLHKPG 128
>gb|AAM65234.1| unknown [Arabidopsis thaliana]
Length = 138
Score = 66.2 bits (160), Expect = 9e-11
Identities = 31/66 (46%), Positives = 48/66 (71%)
Frame = -3
Query: 371 SYPIRTLSAVLGSEEAAKEAVVYDFEDEINDNFSAVITPENAVQLLKQPGVLHIIPSRGC 192
+Y +RTLS+ LGSEEAAK+A++Y ++ E FSA +TPE ++ KQPGV+ ++PS+
Sbjct: 66 TYHLRTLSSALGSEEAAKDALIYSYK-EAASGFSAKLTPEQVAEISKQPGVIQVVPSQTY 124
Query: 191 KIMKLG 174
++ K G
Sbjct: 125 QLHKPG 130
>pir||T03677 pit2 protein (clone pAL141), Pi starvation induced - common tobacco
gi|676884|dbj|BAA06151.1| The expression is induced by
Pi starvation. [Nicotiana tabacum]
gi|1094819|prf||2106387C Al-induced protein
Length = 92
Score = 61.6 bits (148), Expect = 2e-09
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = -3
Query: 368 YPIRTLSAVLGSEEAAKEAVVYDFEDEINDNFSAVITPENAVQLLKQPGVLHIIPSR 198
Y I+TL++VLGSEEAAKEA++Y ++ + FSA +T E +L KQPGVL I+PS+
Sbjct: 28 YHIKTLASVLGSEEAAKEALIYSYKHAAS-GFSAKLTAEQVSELSKQPGVLQIVPSQ 83
>gb|AAO41126.1| putative Pi starvation induced protein [Oryza sativa (japonica
cultivar-group)]
Length = 116
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = -3
Query: 371 SYPIRTLSAVLGSEEAAKEAVVYDFEDEINDNFSAVITPENAVQLLKQPGVLHIIPSRGC 192
+Y + L+A LGSEE AK A++Y++++ ++ FSA +TP + KQP V ++PS
Sbjct: 47 AYQLSILAAALGSEEKAKGAIIYNYKNVVS-GFSARLTPSELEAVKKQPQVNRVLPSATL 105
Query: 191 KIM 183
+M
Sbjct: 106 SLM 108
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,873,811
Number of Sequences: 1393205
Number of extensions: 6105819
Number of successful extensions: 17733
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 17039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17686
length of database: 448,689,247
effective HSP length: 102
effective length of database: 306,582,337
effective search space used: 7357976088
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
