Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002201A_C01 KMC002201A_c01
(553 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177231.1| putative protein kinase; protein id: At1g70740.... 96 2e-19
dbj|BAC42109.1| putative protein kinase [Arabidopsis thaliana] 96 2e-19
ref|NP_566341.1| putative receptor ser/thr protein kinase; prote... 50 2e-05
gb|AAF07841.1|AC010871_17 putative protein kinase [Arabidopsis t... 50 2e-05
gb|AAD56317.1|AC009326_4 putative receptor ser/thr protein kinas... 50 2e-05
>ref|NP_177231.1| putative protein kinase; protein id: At1g70740.1 [Arabidopsis
thaliana] gi|25287628|pir||H96731 hypothetical protein
F5A18.8 [imported] - Arabidopsis thaliana
gi|12324760|gb|AAG52342.1|AC011663_21 putative protein
kinase; 29119-30743 [Arabidopsis thaliana]
Length = 381
Score = 96.3 bits (238), Expect = 2e-19
Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = -1
Query: 547 EAEQVSTCIQLALLCTQGDPQLRPTMRRVVVMLSRKPGHNHVEEPTRPGVPGSRY-RRPR 371
+ +QV C+Q+ LLC QGDP RP+MRRV ++LSRKPG H+EEP PGVPGSRY RR +
Sbjct: 256 DPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPG--HLEEPDHPGVPGSRYRRRTQ 313
Query: 370 RHSALSSTGGTSGSHSSDSSYHSTSGTVTATGTSSATAN 254
R S +S G S + SS S+ S T T TG A+
Sbjct: 314 RPSGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPAS 352
>dbj|BAC42109.1| putative protein kinase [Arabidopsis thaliana]
Length = 159
Score = 96.3 bits (238), Expect = 2e-19
Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = -1
Query: 547 EAEQVSTCIQLALLCTQGDPQLRPTMRRVVVMLSRKPGHNHVEEPTRPGVPGSRY-RRPR 371
+ +QV C+Q+ LLC QGDP RP+MRRV ++LSRKPG H+EEP PGVPGSRY RR +
Sbjct: 34 DPDQVKLCVQIGLLCVQGDPHQRPSMRRVSLLLSRKPG--HLEEPDHPGVPGSRYRRRTQ 91
Query: 370 RHSALSSTGGTSGSHSSDSSYHSTSGTVTATGTSSATAN 254
R S +S G S + SS S+ S T T TG A+
Sbjct: 92 RPSGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPAS 130
>ref|NP_566341.1| putative receptor ser/thr protein kinase; protein id: At3g09010.1,
supported by cDNA: 124301. [Arabidopsis thaliana]
gi|21537226|gb|AAM61567.1| putative receptor ser thr
protein kinase [Arabidopsis thaliana]
Length = 393
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -1
Query: 544 AEQVSTCIQLALLCTQGDPQLRPTMRRVVVMLSRKPGHNHVEEPTRPGVPGSRYR---RP 374
A++V+ I++AL CTQ Q RP M++V+ ML RK + + + T PGV YR R
Sbjct: 285 ADEVTRFIKVALFCTQAAAQKRPNMKQVMEMLRRKELNLNEDALTEPGV----YRGVNRG 340
Query: 373 RRHSALSSTGGTSGSHSSDSSYHSTSGTVTATGTSSAT 260
R H + G GS SS G +A S +
Sbjct: 341 RNHRGIGLRVGQGGSSQESSSTQRDKGKSSAVPQGSTS 378
>gb|AAF07841.1|AC010871_17 putative protein kinase [Arabidopsis thaliana]
Length = 384
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -1
Query: 544 AEQVSTCIQLALLCTQGDPQLRPTMRRVVVMLSRKPGHNHVEEPTRPGVPGSRYR---RP 374
A++V+ I++AL CTQ Q RP M++V+ ML RK + + + T PGV YR R
Sbjct: 276 ADEVTRFIKVALFCTQAAAQKRPNMKQVMEMLRRKELNLNEDALTEPGV----YRGVNRG 331
Query: 373 RRHSALSSTGGTSGSHSSDSSYHSTSGTVTATGTSSAT 260
R H + G GS SS G +A S +
Sbjct: 332 RNHRGIGLRVGQGGSSQESSSTQRDKGKSSAVPQGSTS 369
>gb|AAD56317.1|AC009326_4 putative receptor ser/thr protein kinase [Arabidopsis thaliana]
Length = 383
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -1
Query: 544 AEQVSTCIQLALLCTQGDPQLRPTMRRVVVMLSRKPGHNHVEEPTRPGVPGSRYR---RP 374
A++V+ I++AL CTQ Q RP M++V+ ML RK + + + T PGV YR R
Sbjct: 275 ADEVTRFIKVALFCTQAAAQKRPNMKQVMEMLRRKELNLNEDALTEPGV----YRGVNRG 330
Query: 373 RRHSALSSTGGTSGSHSSDSSYHSTSGTVTATGTSSAT 260
R H + G GS SS G +A S +
Sbjct: 331 RNHRGIGLRVGQGGSSQESSSTQRDKGKSSAVPQGSTS 368
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,678,368
Number of Sequences: 1393205
Number of extensions: 10678119
Number of successful extensions: 40644
Number of sequences better than 10.0: 438
Number of HSP's better than 10.0 without gapping: 36754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40388
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
