KMC002198A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC002198A_C01 KMC002198A_c01
atgctgcaagagtttattGATTTATGGAACTTCTTGATAAATTCCTAAAAATTTTTGTGT
ACCACTATTTTCTAGCAAACCGCCACAAATTGCATTGCAGGTGTCTAGCCGAAAATACGG
TACATGAATAGGCGTACATGGTGTGCCCCAATCTAAGGATTGACATTGAAACTTCTTAAT
ACTTGTGAACACATGGTGTACACTAATCTAAGGATTAACCAATTGAACATATTAGTACTA
AGAAAAATCATTTTGAACTCTTGGTTTGTTGTATGATATCTTGAATAAGGAGGGTCACAT
TAGTGTGAGAAGACCCTCCTTCTTCCACAGCTCTCTTAGCCATCTCAGCAAGCTCTTGAA
CTCTTCTTCTCATTTCATCACTTTGGCTACTCTCATACATCAACTCTTCAATTGCTCTCT
CAACATCTTCCTTCTTCACTAGCACCCCTATTTCCTCTTCCTCACCCCATTTCACAGGAG
CCTCCACTCCAACTCTCACTCCAACTCCCAAAATCTGCACAATCAGCTTCT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002198A_C01 KMC002198A_c01
         (531 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB86932.1| glucosyltransferase-14 [Vigna angularis]              129  2e-29
ref|NP_181215.1| putative glucosyl transferase; protein id: At2g...   117  1e-25
ref|NP_181214.1| putative glucosyl transferase; protein id: At2g...   116  2e-25
ref|NP_181213.1| putative glucosyl transferase; protein id: At2g...   114  6e-25
ref|NP_181216.1| putative glucosyl transferase; protein id: At2g...   113  2e-24

>dbj|BAB86932.1| glucosyltransferase-14 [Vigna angularis]
          Length = 471

 Score =  129 bits (324), Expect = 2e-29
 Identities = 63/90 (70%), Positives = 81/90 (90%)
 Frame = -3

Query: 529 KLIVQILGVGVRVGVEAPVKWGEEEEIGVLVKKEDVERAIEELMYESSQSDEMRRRVQEL 350
           KLIVQIL VGV+VGVE PV+WG+EEE  +LVKKEDVERAI ELM E+ +S+++R RV+E 
Sbjct: 379 KLIVQILKVGVKVGVEVPVEWGQEEETSILVKKEDVERAINELMDETMESEKIRERVKEF 438

Query: 349 AEMAKRAVEEGGSSHTNVTLLIQDIIQQTK 260
           A+MAK+AVE+GGSSH+NVTLLIQ+I+QQ++
Sbjct: 439 ADMAKKAVEQGGSSHSNVTLLIQNIMQQSQ 468

>ref|NP_181215.1| putative glucosyl transferase; protein id: At2g36770.1, supported
           by cDNA: gi_20856889 [Arabidopsis thaliana]
           gi|25286802|pir||E84784 probable glucosyl transferase
           [imported] - Arabidopsis thaliana
           gi|4415922|gb|AAD20153.1| putative glucosyl transferase
           [Arabidopsis thaliana] gi|20856890|gb|AAM26689.1|
           At2g36770/F13K3.17 [Arabidopsis thaliana]
           gi|25090305|gb|AAN72273.1| At2g36770/F13K3.17
           [Arabidopsis thaliana]
          Length = 496

 Score =  117 bits (292), Expect = 1e-25
 Identities = 58/91 (63%), Positives = 72/91 (78%)
 Frame = -3

Query: 529 KLIVQILGVGVRVGVEAPVKWGEEEEIGVLVKKEDVERAIEELMYESSQSDEMRRRVQEL 350
           KL+VQ+L  GV  GVE  +KWGEEE+IGVLV KE V++A+EELM  S  + E RRRV+EL
Sbjct: 404 KLVVQVLKAGVSAGVEEVMKWGEEEKIGVLVDKEGVKKAVEELMGASDDAKERRRRVKEL 463

Query: 349 AEMAKRAVEEGGSSHTNVTLLIQDIIQQTKS 257
            E A +AVEEGGSSH+N+T L+QDI+QQ KS
Sbjct: 464 GESAHKAVEEGGSSHSNITYLLQDIMQQVKS 494

>ref|NP_181214.1| putative glucosyl transferase; protein id: At2g36760.1 [Arabidopsis
           thaliana] gi|25286791|pir||D84784 probable glucosyl
           transferase [imported] - Arabidopsis thaliana
           gi|4415921|gb|AAD20152.1| putative glucosyl transferase
           [Arabidopsis thaliana]
          Length = 496

 Score =  116 bits (290), Expect = 2e-25
 Identities = 56/91 (61%), Positives = 74/91 (80%)
 Frame = -3

Query: 529 KLIVQILGVGVRVGVEAPVKWGEEEEIGVLVKKEDVERAIEELMYESSQSDEMRRRVQEL 350
           KLIVQ+L  GV VGVE  +KWGEEE IGVLV KE V++A++E+M ES ++ E R+RV+EL
Sbjct: 404 KLIVQVLKAGVSVGVEEVMKWGEEESIGVLVDKEGVKKAVDEIMGESDEAKERRKRVREL 463

Query: 349 AEMAKRAVEEGGSSHTNVTLLIQDIIQQTKS 257
            E+A +AVEEGGSSH+N+  L+QDI+QQ +S
Sbjct: 464 GELAHKAVEEGGSSHSNIIFLLQDIMQQVES 494

>ref|NP_181213.1| putative glucosyl transferase; protein id: At2g36750.1 [Arabidopsis
           thaliana] gi|25286801|pir||C84784 probable glucosyl
           transferase [imported] - Arabidopsis thaliana
           gi|4415920|gb|AAD20151.1| putative glucosyl transferase
           [Arabidopsis thaliana]
          Length = 491

 Score =  114 bits (286), Expect = 6e-25
 Identities = 56/93 (60%), Positives = 74/93 (79%)
 Frame = -3

Query: 529 KLIVQILGVGVRVGVEAPVKWGEEEEIGVLVKKEDVERAIEELMYESSQSDEMRRRVQEL 350
           KL VQIL  GVR GVE  ++WGEEE+IGVLV KE V++A+EELM +S+ + E R+RV+EL
Sbjct: 399 KLAVQILKAGVRAGVEESMRWGEEEKIGVLVDKEGVKKAVEELMGDSNDAKERRKRVKEL 458

Query: 349 AEMAKRAVEEGGSSHTNVTLLIQDIIQQTKSSK 251
            E+A +AVEEGGSSH+N+T L+QDI+Q  +  K
Sbjct: 459 GELAHKAVEEGGSSHSNITFLLQDIMQLEQPKK 491

>ref|NP_181216.1| putative glucosyl transferase; protein id: At2g36780.1, supported
           by cDNA: gi_15028388, supported by cDNA: gi_19310660
           [Arabidopsis thaliana] gi|25286792|pir||F84784 probable
           glucosyl transferase [imported] - Arabidopsis thaliana
           gi|4415923|gb|AAD20154.1| putative glucosyl transferase
           [Arabidopsis thaliana] gi|15028389|gb|AAK76671.1|
           putative glucosyl transferase [Arabidopsis thaliana]
           gi|19310661|gb|AAL85061.1| putative glucosyl transferase
           [Arabidopsis thaliana]
          Length = 496

 Score =  113 bits (282), Expect = 2e-24
 Identities = 54/87 (62%), Positives = 72/87 (82%)
 Frame = -3

Query: 529 KLIVQILGVGVRVGVEAPVKWGEEEEIGVLVKKEDVERAIEELMYESSQSDEMRRRVQEL 350
           KL+VQ+L  GV  GVE  +KWGEE++IGVLV KE V++A+EELM +S  + E RRRV+EL
Sbjct: 404 KLVVQVLKAGVSAGVEEVMKWGEEDKIGVLVDKEGVKKAVEELMGDSDDAKERRRRVKEL 463

Query: 349 AEMAKRAVEEGGSSHTNVTLLIQDIIQ 269
            E+A +AVE+GGSSH+N+TLL+QDI+Q
Sbjct: 464 GELAHKAVEKGGSSHSNITLLLQDIMQ 490

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 436,071,660
Number of Sequences: 1393205
Number of extensions: 8600877
Number of successful extensions: 37173
Number of sequences better than 10.0: 209
Number of HSP's better than 10.0 without gapping: 32610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36591
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF094b07_f BP033194 1 531
2 MR011a09_f BP076755 19 397




Lotus japonicus
Kazusa DNA Research Institute