KMC002192A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC002192A_C01 KMC002192A_c01
caaacaaaaaaaatccctttataactaaacaatgcatATGTAAATAAAAGTTTACATTTT
TTTTTTGGTGCATTGGAAAAACCAACCCTTTTTCTATTATAAAGGGAAGAAGTTGTTTAA
ATGACTCATGATGAAGTTTGGGTTAAATAACTCATCATTCAATCACATTGGAGATAAGTG
AGTTGGAGTTGAAAATAAATTAATAAATAAAATATAGAAATTTCAACTCACTTATCTTAA
ATGTGATTGGATTATGTGTTATTTAACCCAAACTTTTCTTGGGTCATTTAGACAACCCGA
AAGGAATGAAAAATCAGACATAATTATCACCAATTGGTCAGCCACATATCCTAGTTACAT
GATCCATATCCACCAACCGCTAGAAAAGCCATCAAATTCTTTTCCGAAGAGCCACCTTCC
TTCCCTGCCTCCATAGCCAAACCCTTGAATTTCTCTGCATTCCTTCTCACTTCCTCTGCT
TTCTCTCCATTCCCCATCACCGCATCCAAACACTTCCTAATTTCCCCTCCTTCCACAACC
CCATCCTCATTCACGCTATGATCCATCCTCACCCCAATCTTCCACACATCTTCCACCATC
TTCGCATTTGTCATCTGATCACTAA


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002192A_C01 KMC002192A_c01
         (625 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA89009.1| anthocyanin 5-O-glucosyltransferase [Petunia x h...   106  2e-22
dbj|BAB88935.1| glucosyltransferase NTGT2 [Nicotiana tabacum]         105  5e-22
gb|AAK54465.1| cold-induced glucosyl transferase [Solanum sogara...   104  1e-21
ref|NP_563742.1| UDP-glucose transferase(UGT1); protein id: At1g...    96  3e-19
ref|NP_193146.1| UDP-glycosyltransferase family; protein id: At4...    92  4e-18

>dbj|BAA89009.1| anthocyanin 5-O-glucosyltransferase [Petunia x hybrida]
          Length = 468

 Score =  106 bits (265), Expect = 2e-22
 Identities = 53/81 (65%), Positives = 65/81 (79%)
 Frame = -3

Query: 623 SDQMTNAKMVEDVWKIGVRMDHSVNEDGVVEGGEIRKCLDAVMGNGEKAEEVRRNAEKFK 444
           +DQMTNAK VEDVWK GVR+   +NEDGVVE  EI++C++ VM  GEK EE+R+NA+K+K
Sbjct: 383 TDQMTNAKQVEDVWKSGVRV--RINEDGVVESEEIKRCIELVMDGGEKGEELRKNAKKWK 440

Query: 443 GLAMEAGKEGGSSEKNLMAFL 381
            LA EA KEGGSS KNL AF+
Sbjct: 441 ELAREAVKEGGSSHKNLKAFI 461

>dbj|BAB88935.1| glucosyltransferase NTGT2 [Nicotiana tabacum]
          Length = 470

 Score =  105 bits (262), Expect = 5e-22
 Identities = 54/87 (62%), Positives = 66/87 (75%)
 Frame = -3

Query: 623 SDQMTNAKMVEDVWKIGVRMDHSVNEDGVVEGGEIRKCLDAVMGNGEKAEEVRRNAEKFK 444
           +DQ TNAK++EDVWK GVR+    NEDGVVE  EI++C++ VM  GEK EE+RRNA+K+K
Sbjct: 385 TDQGTNAKLIEDVWKTGVRLKK--NEDGVVESEEIKRCIEMVMDGGEKGEEMRRNAQKWK 442

Query: 443 GLAMEAGKEGGSSEKNLMAFLAVGGYG 363
            LA EA KEGGSSE NL AF+   G G
Sbjct: 443 ELAREAVKEGGSSEMNLKAFVQEVGKG 469

>gb|AAK54465.1| cold-induced glucosyl transferase [Solanum sogarandinum]
          Length = 473

 Score =  104 bits (259), Expect = 1e-21
 Identities = 53/81 (65%), Positives = 64/81 (78%)
 Frame = -3

Query: 623 SDQMTNAKMVEDVWKIGVRMDHSVNEDGVVEGGEIRKCLDAVMGNGEKAEEVRRNAEKFK 444
           +DQ TNAK +EDVWK GVRM   VNEDGVVE  EI++C++ VM  GEK EE+R+NA+K+K
Sbjct: 388 TDQGTNAKWIEDVWKTGVRM--RVNEDGVVESEEIKRCIEIVMDGGEKGEEMRKNAQKWK 445

Query: 443 GLAMEAGKEGGSSEKNLMAFL 381
            LA EA KEGGSSE NL AF+
Sbjct: 446 ELAREAVKEGGSSEVNLKAFV 466

>ref|NP_563742.1| UDP-glucose transferase(UGT1); protein id: At1g05560.1, supported
           by cDNA: gi_13605917, supported by cDNA: gi_13661274,
           supported by cDNA: gi_18700283 [Arabidopsis thaliana]
           gi|8778722|gb|AAF79730.1|AC005106_11 T25N20.21
           [Arabidopsis thaliana]
           gi|13605918|gb|AAK32944.1|AF367358_1 At1g05560/T25N20_20
           [Arabidopsis thaliana]
           gi|13661275|gb|AAK37839.1|AF196777_1
           UDP-glucosyltransferase [Arabidopsis thaliana]
           gi|18700284|gb|AAL77752.1| At1g05560/T25N20_20
           [Arabidopsis thaliana]
          Length = 469

 Score = 96.3 bits (238), Expect = 3e-19
 Identities = 50/81 (61%), Positives = 66/81 (80%)
 Frame = -3

Query: 623 SDQMTNAKMVEDVWKIGVRMDHSVNEDGVVEGGEIRKCLDAVMGNGEKAEEVRRNAEKFK 444
           SDQ TNAK++E+ WK GVR+    N+DG+VE GEIR+CL+AVM   EK+ E+R NA+K+K
Sbjct: 372 SDQPTNAKLLEESWKTGVRVRE--NKDGLVERGEIRRCLEAVME--EKSVELRENAKKWK 427

Query: 443 GLAMEAGKEGGSSEKNLMAFL 381
            LAMEAG+EGGSS+KN+ AF+
Sbjct: 428 RLAMEAGREGGSSDKNMEAFV 448

>ref|NP_193146.1| UDP-glycosyltransferase family; protein id: At4g14090.1, supported
           by cDNA: gi_17065025 [Arabidopsis thaliana]
           gi|7433897|pir||C71402 probable glucosyltransferase -
           Arabidopsis thaliana gi|2244766|emb|CAB10189.1|
           glucosyltransferase like protein [Arabidopsis thaliana]
           gi|7268115|emb|CAB78452.1| glucosyltransferase like
           protein [Arabidopsis thaliana]
           gi|17065026|gb|AAL32667.1| glucosyltransferase
           [Arabidopsis thaliana] gi|21387139|gb|AAM47973.1|
           glucosyltransferase [Arabidopsis thaliana]
           gi|22136734|gb|AAM91686.1| putative glucosyltransferase
           [Arabidopsis thaliana]
          Length = 456

 Score = 92.4 bits (228), Expect = 4e-18
 Identities = 44/81 (54%), Positives = 61/81 (74%)
 Frame = -3

Query: 623 SDQMTNAKMVEDVWKIGVRMDHSVNEDGVVEGGEIRKCLDAVMGNGEKAEEVRRNAEKFK 444
           +DQ T AK+VED W+IGV++   V E+G V+G EIR+CL+ VM  GE+AEE+R NAEK+K
Sbjct: 374 ADQCTTAKLVEDTWRIGVKV--KVGEEGDVDGEEIRRCLEKVMSGGEEAEEMRENAEKWK 431

Query: 443 GLAMEAGKEGGSSEKNLMAFL 381
            +A++A  EGG S+ NL  F+
Sbjct: 432 AMAVDAAAEGGPSDLNLKGFV 452

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 585,444,220
Number of Sequences: 1393205
Number of extensions: 14063737
Number of successful extensions: 43754
Number of sequences better than 10.0: 398
Number of HSP's better than 10.0 without gapping: 38545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42737
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF032f08_f BP029986 1 424
2 GENf049e12 BP060428 38 387
3 GENf043f04 BP060176 186 675
4 GNf033e06 BP069778 214 625




Lotus japonicus
Kazusa DNA Research Institute