>KMC002191A_C01 KMC002191A_c01
AATAAAATTATTGCAACTATCAGCAATTAGCAGAATGAAGTCACAGACAAGACAAGACAA
GAAAATAAAACACTCAAAAATCTTCTGAAATTGCTTCTTAAAATTTTACAACTCCCAGAA
TAAAAATTAACCTAAGATTTTATGTTTTATGTTTATATACTGGGTACAAATTATTTTAAT
ATCCAATATGATAAGTCCCTGTAAATAATTCAACTACAGGACACTGATCCAAGCCTCCTC
CGTTAAAATAATAAATAATAGAACAGTAACATTTTAATCCAGTAGACCAAGTAACACCAC
AATTATTAGCCTTCAACAAACGGATCATGACTCTTGTGGCGTCTCAAATCTTGTTGGGGT
GTCAATTCCCATCATACAGCAAAGGCCCGATATCAAAATTATTAACAGAACTATTCCCAC
TATAAGTCCCTCCAGAAGGGATGATGCAAGCTGGCACACTGGATTGCAAATCGTGGCATT
GGAGGACTCATTTCCATTTGTACTTTCTGCTAGAAATCTTTGCAGTTCTCTGTAAGAAGG
ATACTTGATTGACCTCGAGGGATCTGATACATAGAGAACTGCATACTTTGCCCCAGATTC
TTCCACAGATCTG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002191A_C01 KMC002191A_c01
         (613 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_683563.1| expressed protein; protein id: At3g13410.2, sup...   121  8e-27
gb|AAN60225.1| unknown [Arabidopsis thaliana]                         121  8e-27
gb|AAM67353.1| unknown [Arabidopsis thaliana]                         121  8e-27
ref|NP_566456.2| expressed protein; protein id: At3g13410.1, sup...   121  8e-27
gb|AAL96729.2| hypothetical protein [Dictyostelium discoideum]         36  0.45

>ref|NP_683563.1| expressed protein; protein id: At3g13410.2, supported by cDNA:
           gi_14334707, supported by cDNA: gi_16323423 [Arabidopsis
           thaliana] gi|14334708|gb|AAK59532.1| unknown protein
           [Arabidopsis thaliana] gi|16323424|gb|AAL15206.1|
           unknown protein [Arabidopsis thaliana]
          Length = 321

 Score =  121 bits (303), Expect = 8e-27
 Identities = 62/95 (65%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -2

Query: 609 SVEESGAKYAVLYVSDPSRSIKYPSYRELQRFLAESTNGNESSN-ATICNPVCQLASSLL 433
           SVE+SG+KY  LYVSDP     Y SY+ LQRFLAE+  GN +   AT C+ +C+  SSLL
Sbjct: 230 SVEQSGSKYTALYVSDP---YWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLL 286

Query: 432 EGLIVGIVLLIILISGLCCMMGIDTPTRFETPQES 328
           EG++VGIV L+ILISGLCCM GIDTPTRFETPQ+S
Sbjct: 287 EGILVGIVFLLILISGLCCMAGIDTPTRFETPQDS 321

>gb|AAN60225.1| unknown [Arabidopsis thaliana]
          Length = 321

 Score =  121 bits (303), Expect = 8e-27
 Identities = 62/95 (65%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -2

Query: 609 SVEESGAKYAVLYVSDPSRSIKYPSYRELQRFLAESTNGNESSN-ATICNPVCQLASSLL 433
           SVE+SG+KY  LYVSDP     Y SY+ LQRFLAE+  GN +   AT C+ +C+  SSLL
Sbjct: 230 SVEQSGSKYTALYVSDP---YWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLL 286

Query: 432 EGLIVGIVLLIILISGLCCMMGIDTPTRFETPQES 328
           EG++VGIV L+ILISGLCCM GIDTPTRFETPQ+S
Sbjct: 287 EGILVGIVFLLILISGLCCMAGIDTPTRFETPQDS 321

>gb|AAM67353.1| unknown [Arabidopsis thaliana]
          Length = 203

 Score =  121 bits (303), Expect = 8e-27
 Identities = 62/95 (65%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -2

Query: 609 SVEESGAKYAVLYVSDPSRSIKYPSYRELQRFLAESTNGNESSN-ATICNPVCQLASSLL 433
           SVE+SG+KY  LYVSDP     Y SY+ LQRFLAE+  GN +   AT C+ +C+  SSLL
Sbjct: 112 SVEQSGSKYTALYVSDP---YWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLL 168

Query: 432 EGLIVGIVLLIILISGLCCMMGIDTPTRFETPQES 328
           EG++VGIV L+ILISGLCCM GIDTPTRFETPQ+S
Sbjct: 169 EGILVGIVFLLILISGLCCMAGIDTPTRFETPQDS 203

>ref|NP_566456.2| expressed protein; protein id: At3g13410.1, supported by cDNA:
           11439. [Arabidopsis thaliana]
          Length = 183

 Score =  121 bits (303), Expect = 8e-27
 Identities = 62/95 (65%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -2

Query: 609 SVEESGAKYAVLYVSDPSRSIKYPSYRELQRFLAESTNGNESSN-ATICNPVCQLASSLL 433
           SVE+SG+KY  LYVSDP     Y SY+ LQRFLAE+  GN +   AT C+ +C+  SSLL
Sbjct: 92  SVEQSGSKYTALYVSDP---YWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLL 148

Query: 432 EGLIVGIVLLIILISGLCCMMGIDTPTRFETPQES 328
           EG++VGIV L+ILISGLCCM GIDTPTRFETPQ+S
Sbjct: 149 EGILVGIVFLLILISGLCCMAGIDTPTRFETPQDS 183

>gb|AAL96729.2| hypothetical protein [Dictyostelium discoideum]
          Length = 295

 Score = 35.8 bits (81), Expect = 0.45
 Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 4/61 (6%)
 Frame = -2

Query: 504 STNGNESSNATICNPVCQ----LASSLLEGLIVGIVLLIILISGLCCMMGIDTPTRFETP 337
           S  G+ SS++    P  Q    +   +L   ++  +LL IL +G+CC+  +  P R+E P
Sbjct: 231 SQQGSGSSSSGSNEPTKQHFTYVTGPVLSAYLIISILLAILFTGICCISDLQVPDRYEAP 290

Query: 336 Q 334
           +
Sbjct: 291 K 291

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 513,514,674
Number of Sequences: 1393205
Number of extensions: 10975033
Number of successful extensions: 24227
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24215
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPD038f07_f AV772615 1 487 2 MWM094d03_f AV766269 13 601 3 MR086f06_f BP082632 17 379 4 GENf063a06 BP061022 23 547 5 SPDL003b08_f BP052158 27 490 6 MFB012c08_f BP034785 31 574 7 MF034h05_f BP030119 37 488 8 SPD051h05_f BP048107 63 642 9 MR087f08_f BP082698 73 455 10 MR095h12_f BP083327 74 170 11 GNf007b02 BP067854 77 475 12 MR013e05_f BP076958 77 529 13 GNf059g03 BP071776 79 260 14 MFB005h08_f BP034295 79 614 15 MR024f10_f BP077856 79 439 16 MR049h10_f BP079828 79 405 17 MR061h04_f BP080702 79 489 18 GNf014g11 BP068411 80 234 19 MR062h10_f BP080790 80 413 20 SPD006f04_f BP044491 81 606 21 MR096h08_f BP083393 82 463 22 MPDL046g05_f AV778842 87 633 23 SPDL088a07_f BP057501 97 564 24 GENf043f01 BP060174 137 625

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