Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002190A_C01 KMC002190A_c01
(637 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK43955.1|AF370140_1 unknown protein [Arabidopsis thaliana] 129 3e-29
ref|NP_568521.1| putative protein; protein id: At5g32440.1, supp... 129 3e-29
ref|NP_565228.1| expressed protein; protein id: At1g80040.1, sup... 110 1e-23
ref|NP_195871.1| putative protein; protein id: At5g02510.1 [Arab... 72 5e-12
dbj|BAB21281.1| P0410E03.12 [Oryza sativa (japonica cultivar-gro... 42 0.005
>gb|AAK43955.1|AF370140_1 unknown protein [Arabidopsis thaliana]
Length = 264
Score = 129 bits (324), Expect = 3e-29
Identities = 65/117 (55%), Positives = 84/117 (71%)
Frame = -1
Query: 634 DARARAARLLEVLEKSITAHAGSEATTALQSENLMLKDQIEVLTKEKNCFKSAFRIQLER 455
DA+ARAAR LE LEKSI A G++A LQ EN+MLK Q+E + +E + K A Q +R
Sbjct: 148 DAKARAARALEALEKSINARTGTDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKR 207
Query: 454 LSDYEAKNQELQQLKQLVSQYQEQIRTLEVSNYTLRMHLNQAQQYNPFPGRFPPDAF 284
+ E ++QELQ L+QLV+QYQEQ+RTLEV+NY L +HL QAQQ + PGR+ PD F
Sbjct: 208 QRESEDQSQELQHLRQLVTQYQEQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 264
>ref|NP_568521.1| putative protein; protein id: At5g32440.1, supported by cDNA:
gi_13877754 [Arabidopsis thaliana]
gi|23297090|gb|AAN13090.1| unknown protein [Arabidopsis
thaliana]
Length = 264
Score = 129 bits (324), Expect = 3e-29
Identities = 65/117 (55%), Positives = 84/117 (71%)
Frame = -1
Query: 634 DARARAARLLEVLEKSITAHAGSEATTALQSENLMLKDQIEVLTKEKNCFKSAFRIQLER 455
DA+ARAAR LE LEKSI A G++A LQ EN+MLK Q+E + +E + K A Q +R
Sbjct: 148 DAKARAARALEALEKSINARTGTDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKR 207
Query: 454 LSDYEAKNQELQQLKQLVSQYQEQIRTLEVSNYTLRMHLNQAQQYNPFPGRFPPDAF 284
+ E ++QELQ L+QLV+QYQEQ+RTLEV+NY L +HL QAQQ + PGR+ PD F
Sbjct: 208 QRESEDQSQELQHLRQLVTQYQEQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 264
>ref|NP_565228.1| expressed protein; protein id: At1g80040.1, supported by cDNA:
35603., supported by cDNA: gi_18176073, supported by
cDNA: gi_20465298 [Arabidopsis thaliana]
gi|25406626|pir||H96831 hypothetical protein F18B13.13
[imported] - Arabidopsis thaliana
gi|5902382|gb|AAD55484.1|AC009322_24 Unknown protein
[Arabidopsis thaliana] gi|18176074|gb|AAL59979.1|
unknown protein [Arabidopsis thaliana]
gi|20465299|gb|AAM20053.1| unknown protein [Arabidopsis
thaliana] gi|21593050|gb|AAM64999.1| unknown
[Arabidopsis thaliana]
Length = 248
Score = 110 bits (276), Expect = 1e-23
Identities = 58/118 (49%), Positives = 72/118 (60%)
Frame = -1
Query: 637 DDARARAARLLEVLEKSITAHAGSEATTALQSENLMLKDQIEVLTKEKNCFKSAFRIQLE 458
DDA+ RAAR+LE LEK ++A A EA Q E + ++ Q+E L K+ K A IQ E
Sbjct: 131 DDAKVRAARVLEALEKMLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHE 190
Query: 457 RLSDYEAKNQELQQLKQLVSQYQEQIRTLEVSNYTLRMHLNQAQQYNPFPGRFPPDAF 284
R E N +L LKQLV QYQE++R LEV+NY LRM L Q + N P RF PD F
Sbjct: 191 RQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 248
>ref|NP_195871.1| putative protein; protein id: At5g02510.1 [Arabidopsis thaliana]
gi|11358208|pir||T48272 hypothetical protein T22P11.100
- Arabidopsis thaliana gi|7413640|emb|CAB85988.1|
putative protein [Arabidopsis thaliana]
Length = 179
Score = 72.4 bits (176), Expect = 5e-12
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = -1
Query: 637 DDARARAARLLEVLEKSITAHAGSEATTALQSENLMLKDQIEVLTKEKNCFKSAFRIQLE 458
DD R R A +LE LE I + + + E +K+ ++ L + K Q +
Sbjct: 65 DDMRRRVAVILEALESIIKKNTNASK----KLEYASMKESLQSLINDNQILKRVIANQHQ 120
Query: 457 RLSDYEAKNQELQQLKQLVSQYQEQIRTLEVSNYTLRMHLNQA-QQYNPFPGRFPPDAF 284
R S+ E K +++ L+ +V QYQEQ+ LE+SNY +++HL ++ QQ F G PPD +
Sbjct: 121 RSSENEEKAKQVLHLRGVVGQYQEQVHKLELSNYAMKLHLQRSQQQQTSFSGNLPPDIY 179
>dbj|BAB21281.1| P0410E03.12 [Oryza sativa (japonica cultivar-group)]
Length = 200
Score = 42.4 bits (98), Expect = 0.005
Identities = 30/103 (29%), Positives = 49/103 (47%)
Frame = -1
Query: 637 DDARARAARLLEVLEKSITAHAGSEATTALQSENLMLKDQIEVLTKEKNCFKSAFRIQLE 458
DDAR R AR+L+ ++ A + +++ +++ K A
Sbjct: 94 DDARERGARVLDAFGAAVGAGTAA---------------RLDAASRQIGFLKRAVLFH-H 137
Query: 457 RLSDYEAKNQELQQLKQLVSQYQEQIRTLEVSNYTLRMHLNQA 329
RL + K Q ++L+ + Y+EQ+R LE SNY L +HL QA
Sbjct: 138 RLRTAQEKAQ--RELRWQLDDYREQVRRLEASNYALSLHLRQA 178
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,465,378
Number of Sequences: 1393205
Number of extensions: 11087948
Number of successful extensions: 31155
Number of sequences better than 10.0: 147
Number of HSP's better than 10.0 without gapping: 29293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31033
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
